Tissue expression of RANBP3 - Summary - The Human Protein Atlas

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RANBP3

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TISSUE

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CELL

PATHOLOGY

TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation

Dictionary


Tissue proteome

GENERAL INFORMATION
Gene name	RANBP3
Gene description	RAN binding protein 3
Protein class	Cancer-related genes Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	9
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:	Expressed in all
GTEx:	Expressed in all
FANTOM5:	Expressed in all

Protein evidence

Evidence at protein level

Protein expression

Ubiquitous nuclear and cytoplasmic expression.

DATA RELIABILITY
Data reliability description	Antibody staining consistent with RNA expression data.
Reliability score	Supported based on 2 antibodies. HPA043375 , HPA043389
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RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM)

Protein expression (score)

Brain

Cerebral cortex

Hippocampus

N/A

Caudate

N/A

Cerebellum

N/A

Endocrine tissues

Thyroid gland

Parathyroid gland

Adrenal gland

Bone marrow & immune system

Appendix

Bone marrow

Lymph node

Tonsil

Spleen

Muscle tissues

Heart muscle

Skeletal muscle

Smooth muscle

Lung

Nasopharynx

N/A

Bronchus

N/A

Lung

Liver & gallbladder

Liver

Gallbladder

Pancreas

Pancreas

Gastrointestinal tract

Oral mucosa

N/A

Salivary gland

Esophagus

Stomach

Duodenum

Small intestine

Colon

Rectum

Kidney & urinary bladder

Kidney

Urinary bladder

Male tissues

Testis

Epididymis

Prostate

Seminal vesicle

Female tissues

Breast

Vagina

N/A

Cervix, uterine

Endometrium

Fallopian tube

Ovary

Placenta

Adipose & soft tissue

Adipose tissue

Soft tissue

N/A

Skin

Skin

Cerebral cortex

PROTEIN EXPRESSION OVERVIEW
Organ Expression Alphabetical

RNA EXPRESSION OVERVIEW
HPA dataset Organ Expression Alphabetical RNA tissue category: Expressed in all
GTEx dataset Organ Expression Alphabetical RNA tissue category: Expressed in all
FANTOM5 dataset Organ Expression Alphabetical RNA tissue category: Expressed in all

GENE INFORMATION
Gene name	RANBP3
Synonyms
Description	RAN binding protein 3 (HGNC Symbol)
Entrez gene summary	This gene encodes a protein with a RanBD1 domain that is found in both the nucleus and cytoplasm. This protein plays a role in nuclear export as part of a heteromeric complex. Alternate transcriptional splice variants, encoding different isoforms, have been characterized. [provided by RefSeq, Jul 2008]
Chromosome	19
Cytoband	p13.3
Chromosome location (bp)	5916139 - 5978142
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000031823 (version 83.38)
Entrez gene	8498
UniProt	Q9H6Z4 (UniProt - Evidence at protein level)
neXtProt	NX_Q9H6Z4
Antibodypedia	RANBP3 antibodies

PROTEIN BROWSER

RANBP3-001	RANBP3-002	RANBP3-003	RANBP3-004	RANBP3-012	RANBP3-024	RANBP3-025	RANBP3-030	RANBP3-031

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
RANBP3-001 ENSP00000341483 ENST00000340578	Q9H6Z4 [Direct mapping] Ran-binding protein 3 Show all	Predicted intracellular proteins Cancer-related genes Mutational cancer driver genes Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] GO:0005634 [nucleus] GO:0005654 [nucleoplasm] GO:0005737 [cytoplasm] GO:0008536 [Ran GTPase binding] GO:0015031 [protein transport] GO:0046907 [intracellular transport] GO:0070412 [R-SMAD binding] Show all	567 aa 60.2 kDa	No	0
RANBP3-002 ENSP00000404837 ENST00000439268	Q9H6Z4 [Direct mapping] Ran-binding protein 3 Show all	Predicted intracellular proteins Cancer-related genes Mutational cancer driver genes Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] GO:0005634 [nucleus] GO:0005654 [nucleoplasm] GO:0005737 [cytoplasm] GO:0008536 [Ran GTPase binding] GO:0015031 [protein transport] GO:0046907 [intracellular transport] GO:0070412 [R-SMAD binding] Show all	562 aa 59.7 kDa	No	0
RANBP3-003 ENSP00000034275 ENST00000034275	Q9H6Z4 [Direct mapping] Ran-binding protein 3 Show all	Predicted intracellular proteins Cancer-related genes Mutational cancer driver genes Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] GO:0005634 [nucleus] GO:0005654 [nucleoplasm] GO:0005737 [cytoplasm] GO:0008536 [Ran GTPase binding] GO:0015031 [protein transport] GO:0046907 [intracellular transport] GO:0070412 [R-SMAD binding] Show all	499 aa 53.4 kDa	No	0
RANBP3-004 ENSP00000465085 ENST00000591092	B7Z7F3 [Direct mapping] Ran-binding protein 3; cDNA FLJ58549, highly similar to Ran-binding protein 3 Show all	Predicted intracellular proteins Cancer-related genes Mutational cancer driver genes Protein evidence (Ezkurdia et al 2014) Show all	GO:0005654 [nucleoplasm] GO:0046907 [intracellular transport] Show all	494 aa 52.9 kDa	No	0
RANBP3-012 ENSP00000466638 ENST00000591333	K7EMT3 [Direct mapping] Ran-binding protein 3 Show all	Predicted intracellular proteins Cancer-related genes Mutational cancer driver genes Protein evidence (Ezkurdia et al 2014) Show all		140 aa 14.7 kDa	No	0
RANBP3-024 ENSP00000466761 ENST00000591736	K7EN31 [Direct mapping] Ran-binding protein 3 Show all	Predicted intracellular proteins Cancer-related genes Mutational cancer driver genes Protein evidence (Ezkurdia et al 2014) Show all		172 aa 18.3 kDa	No	0
RANBP3-025 ENSP00000466510 ENST00000590623	K7EMH9 [Direct mapping] Ran-binding protein 3 Show all	Predicted intracellular proteins Cancer-related genes Mutational cancer driver genes Protein evidence (Ezkurdia et al 2014) Show all		51 aa 5.5 kDa	No	0
RANBP3-030 ENSP00000468815 ENST00000592621	K7ESQ0 [Direct mapping] Ran-binding protein 3 Show all	Predicted intracellular proteins Cancer-related genes Mutational cancer driver genes Protein evidence (Ezkurdia et al 2014) Show all	GO:0005654 [nucleoplasm] Show all	122 aa 13 kDa	No	0
RANBP3-031 ENSP00000464774 ENST00000587479	K7EIJ4 [Direct mapping] Ran-binding protein 3 Show all	Predicted intracellular proteins Cancer-related genes Mutational cancer driver genes Protein evidence (Ezkurdia et al 2014) Show all	GO:0005654 [nucleoplasm] GO:0046907 [intracellular transport] Show all	155 aa 17 kDa	No	0

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.