We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • HUMAN PATHOLOGY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
VCL
  • premium

    TISSUE

  • premium

    CELL

  • PATHOLOGY

TISSUE ATLAS PRIMARY DATA SPLEEN

GENE/PROTEIN

Antibody validation


Dictionary

Spleen

Tissue proteome

Spleen

SPLEEN - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:61.8TPM
GTEx:26.4RPKM
FANTOM5:146.6Tags Per Million

SPLEEN - Annotated protein expression

Annotated protein
expression

Cells in red pulp:Medium
Cells in white pulp:Not detected
 

Antibody staining

Antibody HPA002131

 

Antibody CAB002453

 

Cells in red pulp

Medium   Medium  

Cells in white pulp

Not detected   Not detected  
   
   
   

SPLEEN - HPA RNA-seq

Average TPM

61.8

overview Female, age 60 Sample 1
TPM: 73.9
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Male, age 17 Sample 2
TPM: 43.1
Cell types%
Lymphocytes: 40
Macrophages: 35
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 5
overview Male, age 20 Sample 3
TPM: 54.5
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Female, age 19 Sample 4
TPM: 60.2
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 65 Sample 5
TPM: 77.1
Cell types%
Lymphocytes: 35
Macrophages: 30
Endothelial cells: 20
Fibroblasts: 10
Other cell types: 5

SPLEEN - GTEx RNA-seq

Average RPKM

26.4

GTEx sample id

Sample description

RPKM

Spleen
RPKM: 26.4
Samples: 104

Max RPKM: 55.3
Min RPKM: 10.8
Std RPKM: 9.9
Median RPKM: 25.1
GTEX-Y114-0726-SM-4TT6U 50-59 years, female 55.3
GTEX-QDVN-0526-SM-48TZ4 50-59 years, male 54.5
GTEX-XPVG-0626-SM-4B65B 50-59 years, male 52.5
GTEX-Q2AH-0226-SM-48U1I 40-49 years, male 51.3
GTEX-145MN-0126-SM-5RQHY 30-39 years, male 50.7
GTEX-QCQG-0226-SM-48U28 50-59 years, female 47.2
GTEX-POMQ-0126-SM-48TD6 20-29 years, female 44.5
GTEX-ZLWG-0426-SM-4WWFA 50-59 years, female 42.6
GTEX-O5YT-0926-SM-48TDG 20-29 years, male 39.6
GTEX-YB5K-1926-SM-4VDT4 40-49 years, female 39.4
GTEX-T5JW-0126-SM-4DM6K 20-29 years, female 37.6
GTEX-RUSQ-0126-SM-47JWV 50-59 years, male 37.1
GTEX-11P7K-0426-SM-5BC5H 30-39 years, male 36.9
GTEX-W5WG-0626-SM-4SOID 50-59 years, female 36.6
GTEX-ZAB5-0526-SM-5CVMU 50-59 years, male 36.4
GTEX-117YX-2126-SM-5GIEL 50-59 years, male 36.3
GTEX-QLQW-0126-SM-447BK 30-39 years, male 35.0
GTEX-YB5E-0426-SM-5IFHR 40-49 years, male 34.7
GTEX-U3ZN-0126-SM-4DXUM 30-39 years, female 34.6
GTEX-11P81-1326-SM-5GU5S 30-39 years, female 34.1
GTEX-ZZPU-0126-SM-5E446 50-59 years, female 33.4
GTEX-PLZ6-0126-SM-48TC6 30-39 years, male 32.9
GTEX-WFON-0126-SM-4LVM9 40-49 years, male 32.8
GTEX-12WSN-0126-SM-5DUX5 40-49 years, male 32.3
GTEX-ZP4G-0326-SM-4YCEF 20-29 years, female 31.8
GTEX-147F3-0126-SM-5NQBJ 50-59 years, female 31.5
GTEX-11EQ9-0426-SM-5A5JY 30-39 years, male 31.3
GTEX-132QS-0226-SM-5IFFZ 60-69 years, male 31.2
GTEX-QMRM-0226-SM-4R1K7 50-59 years, male 31.1
GTEX-146FR-1926-SM-5NQA6 60-69 years, female 30.9
GTEX-S4Z8-0226-SM-4AD5K 60-69 years, male 30.6
GTEX-YEC4-0126-SM-4W21T 40-49 years, male 30.6
GTEX-XMK1-0126-SM-4B65F 40-49 years, male 30.1
GTEX-1399S-0226-SM-5IFFG 30-39 years, female 29.8
GTEX-X4LF-0226-SM-4QAS8 50-59 years, male 29.4
GTEX-Z9EW-0726-SM-5HL9H 40-49 years, male 29.3
GTEX-12WSG-0926-SM-5EGIH 50-59 years, female 29.0
GTEX-P4QS-0926-SM-48TBS 60-69 years, male 28.9
GTEX-ZLFU-0526-SM-4WWBN 40-49 years, male 28.5
GTEX-YFCO-0926-SM-5LUA5 40-49 years, male 28.3
GTEX-UJHI-0126-SM-4IHLP 50-59 years, female 27.9
GTEX-ZV6S-0826-SM-5NQ6Z 40-49 years, female 27.8
GTEX-QV31-0126-SM-447BP 30-39 years, male 27.3
GTEX-144GN-2126-SM-5O99D 50-59 years, male 27.1
GTEX-ZPU1-1026-SM-4YCEQ 40-49 years, male 26.7
GTEX-11LCK-0126-SM-5A5M5 30-39 years, male 26.6
GTEX-1122O-0526-SM-5N9DM 60-69 years, female 26.5
GTEX-13111-0126-SM-5EGHO 50-59 years, male 26.5
GTEX-13PL7-1126-SM-5MR5O 60-69 years, female 26.4
GTEX-OIZH-0926-SM-48TBR 50-59 years, male 26.1
GTEX-131XG-0426-SM-5IFGD 50-59 years, female 25.4
GTEX-13CF3-0226-SM-5J1NW 60-69 years, female 25.2
GTEX-XAJ8-0126-SM-47JYG 40-49 years, male 25.1
GTEX-XUJ4-0226-SM-4BOP8 60-69 years, female 25.1
GTEX-P4PP-0926-SM-48TBZ 30-39 years, female 24.7
GTEX-WHWD-0126-SM-4OORS 50-59 years, male 24.5
GTEX-X3Y1-0126-SM-4PQZA 40-49 years, male 24.4
GTEX-11VI4-0126-SM-5GU6Z 40-49 years, female 24.1
GTEX-12WSJ-0526-SM-5GCOZ 40-49 years, female 24.0
GTEX-13PVR-0326-SM-5RQJY 60-69 years, female 24.0
GTEX-ZVZP-0726-SM-59HKA 50-59 years, male 23.7
GTEX-U4B1-0526-SM-4DXTK 40-49 years, male 23.6
GTEX-S3XE-0626-SM-4AD6B 50-59 years, male 22.6
GTEX-ZVP2-0526-SM-51MSC 50-59 years, male 22.4
GTEX-Y5LM-0326-SM-4VBRN 40-49 years, female 22.3
GTEX-ZYFG-0726-SM-5GIDX 60-69 years, female 22.3
GTEX-VJYA-0126-SM-4KL1P 60-69 years, male 22.0
GTEX-R55G-0226-SM-48FEI 40-49 years, female 21.6
GTEX-Q734-0226-SM-48U1A 40-49 years, female 21.3
GTEX-139T6-0226-SM-5IFGZ 50-59 years, male 21.1
GTEX-PW2O-0126-SM-48TC8 20-29 years, male 20.8
GTEX-PX3G-0926-SM-48U12 20-29 years, female 20.3
GTEX-OOBJ-0926-SM-48TDO 60-69 years, male 20.0
GTEX-ZYWO-0226-SM-5GZX3 40-49 years, female 20.0
GTEX-139YR-0426-SM-5IFFV 50-59 years, male 19.5
GTEX-146FQ-0626-SM-5LU9U 30-39 years, male 19.3
GTEX-11XUK-0426-SM-5EQML 40-49 years, female 19.2
GTEX-14DAR-0326-SM-5S2PS 50-59 years, male 19.1
GTEX-1211K-0426-SM-5FQTP 60-69 years, female 18.4
GTEX-12WSK-0126-SM-5GCO7 40-49 years, female 18.3
GTEX-Y3I4-0126-SM-4TT26 50-59 years, male 18.1
GTEX-XV7Q-0126-SM-4BRVK 40-49 years, female 18.0
GTEX-ZDTT-1026-SM-5KM19 60-69 years, male 18.0
GTEX-13X6H-0726-SM-5Q5BX 50-59 years, female 17.9
GTEX-UPK5-1626-SM-4JBHI 40-49 years, male 17.5
GTEX-13S86-0126-SM-5S2PI 40-49 years, male 17.4
GTEX-13FH7-1326-SM-5IFG8 50-59 years, female 17.0
GTEX-Y8LW-0126-SM-4VBS1 50-59 years, female 16.8
GTEX-X585-1826-SM-4QAS3 50-59 years, male 15.8
GTEX-12BJ1-0726-SM-5EGGF 60-69 years, male 15.5
GTEX-1399R-0226-SM-5IJGG 30-39 years, male 15.1
GTEX-XQ8I-1726-SM-4BOQB 50-59 years, male 15.1
GTEX-131XE-1126-SM-5EGHW 50-59 years, male 14.9
GTEX-XGQ4-0126-SM-4AT4H 50-59 years, male 14.5
GTEX-13VXT-1326-SM-5LU3Y 20-29 years, female 13.9
GTEX-11DXX-0726-SM-5H12X 60-69 years, female 13.7
GTEX-11NSD-0426-SM-5N9CR 20-29 years, male 13.7
GTEX-13N11-0126-SM-5KM2Z 50-59 years, female 13.4
GTEX-14E6E-1226-SM-5S2R5 30-39 years, male 13.2
GTEX-Y3IK-0126-SM-4WWE9 50-59 years, female 12.2
GTEX-QV44-0126-SM-4R1KH 50-59 years, male 12.1
GTEX-U3ZH-0126-SM-4DXUK 30-39 years, male 11.5
GTEX-XXEK-0126-SM-4BRVU 50-59 years, male 11.2
GTEX-13U4I-1626-SM-5IFFR 40-49 years, female 10.8
Show all

SPLEEN - FANTOM5 CAGE

Average Tags Per Million

146.6

FANTOM5 sample id

Sample description

Tags Per Million

Spleen
Tags Per Million: 146.6
FF:10025-101D7 39,50,70 years, male 146.6

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.