We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • HUMAN PATHOLOGY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
MRI1
  • TISSUE

  • premium

    CELL

  • PATHOLOGY

TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:8.8TPM
GTEx:12.5RPKM
FANTOM5:16.4Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:High
Myoepithelial cells:Low
 

Antibody staining

Antibody HPA042744

 

Antibody CAB045988

 

Adipocytes

Not detected   Not detected  

Glandular cells

Not detected   High  

Myoepithelial cells

Not detected   Low  
   
   
   

BREAST - HPA RNA-seq

Average TPM

8.8

overview Female, age 52 Sample 1
TPM: 11
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80 Sample 2
TPM: 7.2
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47 Sample 3
TPM: 7.2
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38 Sample 4
TPM: 9.6
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

12.5

GTEx sample id

Sample description

RPKM

Breast - Mammary Tissue
RPKM: 12.5
Samples: 214

Max RPKM: 39.8
Min RPKM: 3.1
Std RPKM: 5.2
Median RPKM: 11.5
GTEX-14ABY-2126-SM-5QGQZ 50-59 years, male 39.8
GTEX-XUZC-1626-SM-4BRVP 30-39 years, female 28.8
GTEX-12ZZX-1126-SM-5EGKB 40-49 years, female 27.4
GTEX-YFC4-1426-SM-5IFJG 40-49 years, female 26.6
GTEX-13NZB-2126-SM-5MR4Y 30-39 years, male 26.4
GTEX-13CF2-2026-SM-5K7VI 60-69 years, male 24.6
GTEX-13OW5-2226-SM-5L3HC 60-69 years, male 24.2
GTEX-13W3W-1226-SM-5LU4H 60-69 years, female 23.5
GTEX-RWS6-1926-SM-47JXY 60-69 years, female 21.9
GTEX-Y111-2026-SM-4SOJA 50-59 years, male 21.4
GTEX-13PL6-2926-SM-5L3I2 40-49 years, female 21.3
GTEX-131YS-0626-SM-5EGKL 60-69 years, female 21.2
GTEX-14AS3-1626-SM-5S2OY 40-49 years, female 20.9
GTEX-11LCK-2426-SM-5HL5F 30-39 years, male 20.6
GTEX-QEG5-0726-SM-4R1JQ 20-29 years, male 20.6
GTEX-U3ZH-1426-SM-4DXSR 30-39 years, male 20.4
GTEX-U3ZN-1926-SM-4DXSG 30-39 years, female 20.4
GTEX-ZC5H-2626-SM-5J2MG 40-49 years, female 20.4
GTEX-11EI6-0626-SM-5985T 60-69 years, male 20.2
GTEX-WYJK-1326-SM-3NB2T 50-59 years, male 19.9
GTEX-11DXW-0626-SM-5N9ER 40-49 years, male 19.7
GTEX-S341-1526-SM-4AD6K 40-49 years, female 19.4
GTEX-UPK5-2326-SM-3P5Z8 40-49 years, male 19.1
GTEX-11WQC-1726-SM-5GU4W 60-69 years, male 19.0
GTEX-VUSG-2226-SM-4KKZO 50-59 years, male 19.0
GTEX-ZLV1-1426-SM-4WWES 60-69 years, female 19.0
GTEX-11PRG-0826-SM-5EQ6A 50-59 years, male 18.9
GTEX-R3RS-0626-SM-48FE1 40-49 years, female 18.8
GTEX-111YS-1926-SM-5GICC 60-69 years, male 18.7
GTEX-13NZ9-1026-SM-5MR5K 50-59 years, male 18.6
GTEX-QEL4-2126-SM-447AE 50-59 years, male 18.5
GTEX-ZEX8-2226-SM-57WC6 50-59 years, male 18.2
GTEX-1399U-1826-SM-5PNZ1 50-59 years, female 18.1
GTEX-XOT4-0726-SM-4GIAW 60-69 years, female 18.1
GTEX-11P7K-0726-SM-5EGKX 30-39 years, male 17.8
GTEX-ZVTK-0326-SM-51MRR 20-29 years, male 17.7
GTEX-UJHI-1426-SM-3DB9C 50-59 years, female 17.4
GTEX-1117F-2826-SM-5GZXL 60-69 years, female 17.1
GTEX-T5JW-2026-SM-4DM63 20-29 years, female 17.1
GTEX-ZY6K-1626-SM-5GZWV 50-59 years, male 17.1
GTEX-WYVS-1726-SM-3NMAY 40-49 years, female 16.9
GTEX-X15G-1626-SM-3NMB3 50-59 years, female 16.8
GTEX-XUW1-2326-SM-4BOO5 50-59 years, female 16.8
GTEX-T5JC-2126-SM-32PMO 20-29 years, male 16.5
GTEX-13FTY-2226-SM-5J1ND 40-49 years, female 16.4
GTEX-ZVT2-1826-SM-5NQ8W 50-59 years, female 16.4
GTEX-QVJO-1826-SM-447C9 60-69 years, female 16.0
GTEX-11GS4-2126-SM-5A5KR 60-69 years, male 15.8
GTEX-XMD1-0826-SM-4AT52 60-69 years, male 15.8
GTEX-145MN-1926-SM-5SIAI 30-39 years, male 15.7
GTEX-XUJ4-1926-SM-4BOOV 60-69 years, female 15.6
GTEX-T6MO-0326-SM-32QOK 40-49 years, female 15.5
GTEX-R53T-1526-SM-48FEK 50-59 years, female 15.4
GTEX-T2IS-1526-SM-32QPR 20-29 years, female 15.3
GTEX-Q2AG-0326-SM-48U1O 40-49 years, female 15.2
GTEX-ZV7C-1826-SM-5NQ83 50-59 years, male 15.2
GTEX-1192X-2326-SM-5987X 50-59 years, male 15.1
GTEX-T6MN-0726-SM-32PML 50-59 years, male 14.9
GTEX-Y3IK-2326-SM-4WWDT 50-59 years, female 14.9
GTEX-139T8-0826-SM-5L3DE 60-69 years, male 14.8
GTEX-ZVE2-1226-SM-5NQ8R 50-59 years, male 14.7
GTEX-ZYT6-0126-SM-5E45J 30-39 years, male 14.7
GTEX-133LE-1726-SM-5K7VQ 20-29 years, female 14.6
GTEX-131XW-0726-SM-5EGK3 50-59 years, female 14.4
GTEX-145LT-0726-SM-5S2VM 40-49 years, male 14.4
GTEX-TML8-1226-SM-32QON 40-49 years, female 14.4
GTEX-Y5V5-2126-SM-4WWFO 60-69 years, female 14.4
GTEX-Y5V6-2126-SM-4WWFX 60-69 years, male 14.4
GTEX-11NSD-0926-SM-5N9DR 20-29 years, male 14.3
GTEX-S4P3-1326-SM-4AD6V 50-59 years, female 14.3
GTEX-147F4-2826-SM-5NQBN 50-59 years, male 14.2
GTEX-ZF2S-2026-SM-5E461 50-59 years, female 14.1
GTEX-ZZPU-0626-SM-5E43T 50-59 years, female 14.1
GTEX-132AR-0826-SM-5EGK6 50-59 years, female 13.9
GTEX-SIU7-1626-SM-4BRUK 50-59 years, male 13.9
GTEX-117XS-1926-SM-5GICO 60-69 years, male 13.8
GTEX-11I78-2226-SM-5PNYA 50-59 years, female 13.7
GTEX-QDT8-0626-SM-48TYW 30-39 years, female 13.5
GTEX-RU72-0626-SM-46MUI 50-59 years, female 13.3
GTEX-11EM3-1326-SM-5N9C6 20-29 years, female 13.2
GTEX-S7SE-0826-SM-4AT4D 50-59 years, male 13.2
GTEX-WXYG-2226-SM-4E3IM 50-59 years, female 13.2
GTEX-XQ3S-1326-SM-4BOPQ 20-29 years, male 13.1
GTEX-11TT1-2126-SM-5GU5Y 20-29 years, male 13.0
GTEX-YJ8O-2226-SM-5IFHW 40-49 years, female 13.0
GTEX-1314G-1226-SM-5BC6D 30-39 years, male 12.8
GTEX-ZYWO-2326-SM-5GZY4 40-49 years, female 12.8
GTEX-ZDTT-2126-SM-5S2OJ 60-69 years, male 12.7
GTEX-132NY-0826-SM-5K7Y7 60-69 years, male 12.6
GTEX-11EMC-2026-SM-5A5JV 60-69 years, female 12.4
GTEX-ZTTD-1026-SM-51MRD 50-59 years, male 12.2
GTEX-XQ8I-2426-SM-4WAXY 50-59 years, male 12.1
GTEX-R55F-1726-SM-2TF4R 50-59 years, male 12.0
GTEX-XMD2-0926-SM-4WWEF 60-69 years, female 12.0
GTEX-ZV6S-1826-SM-5NQ8D 40-49 years, female 12.0
GTEX-XGQ4-0926-SM-4AT4U 50-59 years, male 11.9
GTEX-WYBS-0926-SM-3NM94 60-69 years, female 11.8
GTEX-11DXZ-1926-SM-5GZZL 50-59 years, male 11.7
GTEX-146FH-0826-SM-5SI8T 50-59 years, female 11.7
GTEX-QMRM-1626-SM-4R1KV 50-59 years, male 11.7
GTEX-13OW8-0226-SM-5K7UP 60-69 years, male 11.6
GTEX-S4UY-0726-SM-4AD6X 40-49 years, female 11.6
GTEX-XBED-1626-SM-47JYN 60-69 years, male 11.6
GTEX-132Q8-1426-SM-5EGK7 60-69 years, male 11.5
GTEX-R55D-0826-SM-48FEA 50-59 years, male 11.5
GTEX-S4Q7-1126-SM-4AD6R 20-29 years, male 11.5
GTEX-YB5K-1626-SM-5IFIN 40-49 years, female 11.5
GTEX-Y114-2026-SM-4TT7L 50-59 years, female 11.4
GTEX-YFCO-1826-SM-4W1YH 40-49 years, male 11.4
GTEX-ZU9S-1926-SM-5NQBP 30-39 years, male 11.4
GTEX-SE5C-2126-SM-4BRUJ 40-49 years, female 11.3
GTEX-WY7C-2726-SM-3NB3P 50-59 years, male 11.3
GTEX-ZVZQ-0826-SM-51MRF 60-69 years, female 11.3
GTEX-S32W-2026-SM-4AD6E 50-59 years, female 11.2
GTEX-T2YK-2226-SM-32QPT 50-59 years, male 11.2
GTEX-U412-1826-SM-4DXTJ 60-69 years, male 11.2
GTEX-XMK1-1126-SM-4IHJ8 40-49 years, male 11.2
GTEX-139TU-0626-SM-5KM3X 60-69 years, male 11.1
GTEX-WRHU-0326-SM-3MJFY 50-59 years, female 11.1
GTEX-13113-1726-SM-5GCOO 60-69 years, female 11.0
GTEX-13FHO-0826-SM-5L3E8 60-69 years, male 11.0
GTEX-1211K-1926-SM-5EQLB 60-69 years, female 10.9
GTEX-13O3P-0826-SM-5L3DH 50-59 years, male 10.9
GTEX-ZXES-0826-SM-5E43C 30-39 years, female 10.9
GTEX-ZAJG-0626-SM-5HL8X 50-59 years, female 10.8
GTEX-13S86-1226-SM-5S2OA 40-49 years, male 10.7
GTEX-Y3I4-1526-SM-4TT7K 50-59 years, male 10.6
GTEX-ZF29-1926-SM-5S2P1 60-69 years, female 10.6
GTEX-ZLFU-2126-SM-4WWEV 40-49 years, male 10.6
GTEX-ZUA1-1526-SM-59HLS 40-49 years, male 10.6
GTEX-ZYFC-0826-SM-5E44K 50-59 years, male 10.6
GTEX-ZDXO-0126-SM-5S2ND 60-69 years, male 10.5
GTEX-13QIC-2326-SM-5LU5N 60-69 years, female 10.3
GTEX-11EQ9-1826-SM-5Q5AJ 30-39 years, male 10.2
GTEX-13O61-1826-SM-5KM4I 60-69 years, male 10.2
GTEX-XV7Q-2326-SM-4BRVZ 40-49 years, female 10.2
GTEX-ZF3C-2326-SM-5S2MZ 50-59 years, female 10.2
GTEX-11P81-1926-SM-5BC53 30-39 years, female 10.0
GTEX-Y8LW-1626-SM-5IFHX 50-59 years, female 10.0
GTEX-1122O-1226-SM-5H113 60-69 years, female 9.9
GTEX-11O72-2126-SM-5N9FO 40-49 years, male 9.9
GTEX-145MO-0826-SM-5NQBL 60-69 years, male 9.9
GTEX-WOFL-0826-SM-3MJG1 60-69 years, male 9.9
GTEX-11ZUS-0826-SM-5FQUY 30-39 years, male 9.8
GTEX-ZQG8-0726-SM-5P9H9 60-69 years, female 9.8
GTEX-11ONC-2126-SM-5HL6E 60-69 years, male 9.7
GTEX-YB5E-1726-SM-5IFJ3 40-49 years, male 9.7
GTEX-S33H-0326-SM-4AD6N 30-39 years, male 9.6
GTEX-ZDYS-1126-SM-5K7UB 50-59 years, male 9.6
GTEX-VJWN-0726-SM-3GIJ8 50-59 years, female 9.5
GTEX-X4EP-2926-SM-3P5YQ 60-69 years, female 9.5
GTEX-ZTX8-1226-SM-4YCE9 20-29 years, male 9.4
GTEX-1269C-2426-SM-5FQSN 60-69 years, female 9.3
GTEX-12WSN-1326-SM-5GCNT 40-49 years, male 9.3
GTEX-ZZ64-1226-SM-5E43R 20-29 years, male 9.3
GTEX-13N11-1726-SM-5J1OJ 50-59 years, female 9.2
GTEX-13W46-0826-SM-5LU3H 50-59 years, male 9.2
GTEX-X261-0626-SM-3NMD9 50-59 years, male 9.1
GTEX-YEC3-1026-SM-5IFI5 50-59 years, male 9.1
GTEX-117YX-1426-SM-5H12H 50-59 years, male 9.0
GTEX-11GSO-1926-SM-5A5K3 60-69 years, male 9.0
GTEX-13NZ8-0126-SM-5IJCT 60-69 years, female 9.0
GTEX-ZAB4-2526-SM-5HL8M 40-49 years, male 9.0
GTEX-11ZTT-2326-SM-5EQLG 60-69 years, female 8.9
GTEX-1313W-0826-SM-5EQ4T 50-59 years, female 8.9
GTEX-PSDG-1626-SM-48TCQ 50-59 years, male 8.8
GTEX-144GL-2026-SM-5LU3O 50-59 years, male 8.7
GTEX-12WSB-0626-SM-59HJO 60-69 years, female 8.6
GTEX-11DXY-2326-SM-5GICW 60-69 years, male 8.4
GTEX-12BJ1-1826-SM-5HL9N 60-69 years, male 8.4
GTEX-Y5LM-1726-SM-4VDSX 40-49 years, female 8.4
GTEX-WI4N-1426-SM-3LK7H 40-49 years, female 8.3
GTEX-ZWKS-2826-SM-5NQ74 30-39 years, male 8.3
GTEX-11OF3-1926-SM-59889 60-69 years, male 8.2
GTEX-Y9LG-1426-SM-5IFJZ 30-39 years, male 8.2
GTEX-X4XY-0926-SM-4E3JD 60-69 years, male 8.1
GTEX-11NV4-2026-SM-5N9DG 60-69 years, male 8.0
GTEX-14E6E-1326-SM-5S2NR 30-39 years, male 8.0
GTEX-13D11-1026-SM-5IJFB 50-59 years, female 7.8
GTEX-ZT9W-2026-SM-51MRA 50-59 years, male 7.8
GTEX-TKQ2-1826-SM-33HB2 50-59 years, male 7.7
GTEX-144GM-0926-SM-5O994 20-29 years, male 7.6
GTEX-Y8E4-1626-SM-5S2MW 40-49 years, male 7.6
GTEX-12WSK-2226-SM-5GCO5 40-49 years, female 7.5
GTEX-139T6-1626-SM-5PNYZ 50-59 years, male 7.5
GTEX-ZPIC-1126-SM-5BC7F 40-49 years, female 7.5
GTEX-13FTW-1426-SM-5LZWZ 40-49 years, male 7.4
GTEX-11WQK-2426-SM-5GU5C 50-59 years, male 7.2
GTEX-ZQUD-1926-SM-51MSA 30-39 years, male 7.1
GTEX-11DZ1-0326-SM-5N9BN 50-59 years, male 7.0
GTEX-13FTX-1126-SM-5N9EN 20-29 years, female 6.9
GTEX-TKQ1-0226-SM-33HB5 30-39 years, male 6.9
GTEX-XYKS-1326-SM-4BRUN 60-69 years, female 6.8
GTEX-ZA64-1526-SM-5CVMD 20-29 years, male 6.7
GTEX-11P82-1326-SM-5HL62 20-29 years, male 6.6
GTEX-ZVT4-1026-SM-57WC4 50-59 years, female 6.6
GTEX-12KS4-0126-SM-5Q5A5 30-39 years, male 6.0
GTEX-W5X1-2326-SM-3GIL6 40-49 years, female 5.9
GTEX-REY6-2426-SM-48FF5 60-69 years, male 5.8
GTEX-13CF3-2126-SM-5IFJP 60-69 years, female 5.7
GTEX-U8XE-0826-SM-4E3J1 30-39 years, male 5.6
GTEX-14753-2426-SM-5LU8U 60-69 years, male 5.5
GTEX-UTHO-1026-SM-3GAF7 60-69 years, male 5.5
GTEX-WFON-1826-SM-3GILG 40-49 years, male 5.4
GTEX-ZYW4-0826-SM-5GIDG 60-69 years, male 5.4
GTEX-13O3Q-2226-SM-5KM4O 50-59 years, male 5.2
GTEX-11TUW-1826-SM-5BC5D 60-69 years, male 5.1
GTEX-TMMY-0726-SM-33HBE 40-49 years, female 4.4
GTEX-145ME-1526-SM-5Q5F2 40-49 years, female 4.2
GTEX-12WSM-1726-SM-5BC6J 60-69 years, male 4.1
GTEX-13O3O-0826-SM-5K7WE 60-69 years, female 4.1
GTEX-13N1W-0626-SM-5MR4U 70-79 years, male 4.0
GTEX-RUSQ-2026-SM-4GIAK 50-59 years, male 3.6
GTEX-13PVQ-1026-SM-5KM3M 50-59 years, male 3.1
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

16.4

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 16.4
FF:10080-102A8 77 years, female 16.4

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.