Tissue expression of CDH1 - Staining in spleen - The Human Protein Atlas

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CDH1

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TISSUE

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CELL

PATHOLOGY

TISSUE ATLAS PRIMARY DATA SPLEEN

GENE/PROTEIN

Antibody validation

Dictionary
	Spleen


Tissue proteome
	Spleen

SPLEEN - Expression summary

Protein expression

h

m

l

n

RNA expression

HPA:	14.2	TPM
GTEx:	4.5	RPKM
FANTOM5:	12.4	Tags Per Million

SPLEEN - Annotated protein expression

Annotated protein
expression

Cells in red pulp:	Not detected
Cells in white pulp:	Not detected

Antibody staining	Antibody HPA004812		Antibody CAB000087		Antibody CAB028364		Antibody CAB072855		Antibody CAB072856		Antibody CAB072857
Cells in red pulp	Not detected		Not detected		Not detected		Not detected		Not detected		Not detected
Cells in white pulp	Not detected		Not detected		Not detected		Not detected		Not detected		Not detected

SPLEEN - HPA RNA-seq

Average TPM	14.2

overview

Female, age 60

Sample 1
TPM: 14.2

Cell types%

Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10

overview

Male, age 17

Sample 2
TPM: 17.2

Cell types%

Lymphocytes: 40
Macrophages: 35
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 5

overview

Male, age 20

Sample 3
TPM: 16.2

Cell types%

Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10

overview

Female, age 19

Sample 4
TPM: 10.1

Cell types%

Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 10
Other cell types: 5

overview

Female, age 65

Sample 5
TPM: 13.3

Cell types%

Lymphocytes: 35
Macrophages: 30
Endothelial cells: 20
Fibroblasts: 10
Other cell types: 5

SPLEEN - GTEx RNA-seq

Average RPKM	4.5

GTEx sample id

Sample description

RPKM

Spleen
RPKM: 4.5

Samples: 104

Max RPKM: 11.5
Min RPKM: 0.9
Std RPKM: 2.3
Median RPKM: 3.8

GTEX-W5WG-0626-SM-4SOID

50-59 years, female

11.5

GTEX-YFCO-0926-SM-5LUA5

40-49 years, male

11.3

GTEX-X585-1826-SM-4QAS3

50-59 years, male

10.7

GTEX-PLZ6-0126-SM-48TC6

30-39 years, male

9.9

GTEX-13PVR-0326-SM-5RQJY

60-69 years, female

9.8

GTEX-WHWD-0126-SM-4OORS

50-59 years, male

9.3

GTEX-X3Y1-0126-SM-4PQZA

40-49 years, male

9.1

GTEX-11NSD-0426-SM-5N9CR

20-29 years, male

8.5

GTEX-OIZH-0926-SM-48TBR

50-59 years, male

8.5

GTEX-OOBJ-0926-SM-48TDO

60-69 years, male

8.4

Show all

SPLEEN - FANTOM5 CAGE

Average Tags Per Million	12.4

FANTOM5 sample id

Sample description

Tags Per Million

Spleen
Tags Per Million: 12.4

39,50,70 years, male

12.4

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.