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COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:14.0TPM
GTEx:10.5RPKM
FANTOM5:28.2Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
 

Antibody staining

Antibody HPA037704

  

Antibody HPA037705

  

Endothelial cells

 Medium   Medium  

Glandular cells

 Medium   Medium  
   
   
   

COLON - HPA RNA-seq

Average TPM

14.0
overview Male, age 54 Sample 1
TPM: 11.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 12.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 15.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 11.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 12.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 13
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 17
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 19
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 13
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 16.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 14.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 13.3
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 12.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

10.5

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 9.4
Samples: 149

Max RPKM: 18.9
Min RPKM: 4.5
Std RPKM: 2.5
Median RPKM: 9.1
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 18.9
GTEX-12WSJ-1426-SM-5GCON 40-49 years, female 17.2
GTEX-V955-1726-SM-4JBHF 60-69 years, male 16.7
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 15.7
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 15.2
GTEX-12WSL-1826-SM-5LZW9 50-59 years, male 14.6
GTEX-14A5H-1626-SM-5SIAN 60-69 years, male 14.6
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 14.3
GTEX-13U4I-2626-SM-5SI9C 40-49 years, female 14.1
GTEX-ZY6K-1326-SM-5GZWP 50-59 years, male 14.1
Show all
Colon - Transverse
RPKM: 11.4
Samples: 196

Max RPKM: 20.9
Min RPKM: 4.9
Std RPKM: 2.6
Median RPKM: 10.9
GTEX-147F3-1926-SM-5SIB9 50-59 years, female 20.9
GTEX-11LCK-2026-SM-5A5MA 30-39 years, male 20.6
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 19.9
GTEX-144GN-1126-SM-5LU33 50-59 years, male 19.0
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 17.7
GTEX-RM2N-0926-SM-48FD1 50-59 years, male 17.3
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 17.2
GTEX-ZVP2-1526-SM-5NQ82 50-59 years, male 16.7
GTEX-OXRK-1726-SM-3NB16 50-59 years, female 16.5
GTEX-144GM-1226-SM-5LU52 20-29 years, male 16.3
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

28.2

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 28.2
FF:10014-101C5 62,83,84 years, mixed 28.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.