We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • HUMAN PATHOLOGY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
TPR
  • premium

    TISSUE

  • premium

    CELL

  • PATHOLOGY

TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:24.2TPM
GTEx:18.6RPKM
FANTOM5:42.3Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Glandular cells:Medium
Myoepithelial cells:Medium
 

Antibody staining

Antibody HPA019661

 

Antibody HPA019663

 

Antibody HPA024336

 

Adipocytes

Medium   Medium   Medium  

Glandular cells

Medium   Medium   Medium  

Myoepithelial cells

Medium   Medium   Low  
     
     
     

BREAST - HPA RNA-seq

Average TPM

24.2

overview Female, age 52 Sample 1
TPM: 20.2
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80 Sample 2
TPM: 21.3
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47 Sample 3
TPM: 23.9
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38 Sample 4
TPM: 31.3
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

18.6

GTEx sample id

Sample description

RPKM

Breast - Mammary Tissue
RPKM: 18.6
Samples: 214

Max RPKM: 34.3
Min RPKM: 7.7
Std RPKM: 3.6
Median RPKM: 18.6
GTEX-132Q8-1426-SM-5EGK7 60-69 years, male 34.3
GTEX-ZXES-0826-SM-5E43C 30-39 years, female 29.4
GTEX-ZF2S-2026-SM-5E461 50-59 years, female 28.9
GTEX-111YS-1926-SM-5GICC 60-69 years, male 27.7
GTEX-ZF29-1926-SM-5S2P1 60-69 years, female 27.2
GTEX-TMMY-0726-SM-33HBE 40-49 years, female 27.0
GTEX-WYJK-1326-SM-3NB2T 50-59 years, male 26.6
GTEX-W5X1-2326-SM-3GIL6 40-49 years, female 26.1
GTEX-SIU7-1626-SM-4BRUK 50-59 years, male 25.8
GTEX-U3ZH-1426-SM-4DXSR 30-39 years, male 24.9
GTEX-11P81-1926-SM-5BC53 30-39 years, female 24.7
GTEX-ZZPU-0626-SM-5E43T 50-59 years, female 24.6
GTEX-ZV7C-1826-SM-5NQ83 50-59 years, male 24.4
GTEX-12WSK-2226-SM-5GCO5 40-49 years, female 24.3
GTEX-WYVS-1726-SM-3NMAY 40-49 years, female 24.1
GTEX-12WSB-0626-SM-59HJO 60-69 years, female 24.0
GTEX-13113-1726-SM-5GCOO 60-69 years, female 23.8
GTEX-TML8-1226-SM-32QON 40-49 years, female 23.3
GTEX-R55F-1726-SM-2TF4R 50-59 years, male 23.1
GTEX-ZEX8-2226-SM-57WC6 50-59 years, male 22.9
GTEX-ZV6S-1826-SM-5NQ8D 40-49 years, female 22.8
GTEX-1211K-1926-SM-5EQLB 60-69 years, female 22.6
GTEX-XBED-1626-SM-47JYN 60-69 years, male 22.6
GTEX-11EM3-1326-SM-5N9C6 20-29 years, female 22.3
GTEX-12WSN-1326-SM-5GCNT 40-49 years, male 22.2
GTEX-13N11-1726-SM-5J1OJ 50-59 years, female 22.2
GTEX-TKQ2-1826-SM-33HB2 50-59 years, male 22.2
GTEX-ZTX8-1226-SM-4YCE9 20-29 years, male 22.2
GTEX-1122O-1226-SM-5H113 60-69 years, female 22.1
GTEX-QDT8-0626-SM-48TYW 30-39 years, female 22.0
GTEX-13FTY-2226-SM-5J1ND 40-49 years, female 21.8
GTEX-UJHI-1426-SM-3DB9C 50-59 years, female 21.8
GTEX-Y8LW-1626-SM-5IFHX 50-59 years, female 21.7
GTEX-12WSM-1726-SM-5BC6J 60-69 years, male 21.6
GTEX-146FH-0826-SM-5SI8T 50-59 years, female 21.5
GTEX-ZA64-1526-SM-5CVMD 20-29 years, male 21.4
GTEX-WXYG-2226-SM-4E3IM 50-59 years, female 21.3
GTEX-XUZC-1626-SM-4BRVP 30-39 years, female 21.3
GTEX-VJWN-0726-SM-3GIJ8 50-59 years, female 21.2
GTEX-WFON-1826-SM-3GILG 40-49 years, male 21.2
GTEX-ZVE2-1226-SM-5NQ8R 50-59 years, male 21.2
GTEX-11GSO-1926-SM-5A5K3 60-69 years, male 21.0
GTEX-13NZ8-0126-SM-5IJCT 60-69 years, female 21.0
GTEX-X4EP-2926-SM-3P5YQ 60-69 years, female 20.9
GTEX-T2YK-2226-SM-32QPT 50-59 years, male 20.8
GTEX-Y5V5-2126-SM-4WWFO 60-69 years, female 20.8
GTEX-11NV4-2026-SM-5N9DG 60-69 years, male 20.7
GTEX-ZF3C-2326-SM-5S2MZ 50-59 years, female 20.7
GTEX-117XS-1926-SM-5GICO 60-69 years, male 20.6
GTEX-11P7K-0726-SM-5EGKX 30-39 years, male 20.6
GTEX-11TUW-1826-SM-5BC5D 60-69 years, male 20.6
GTEX-RWS6-1926-SM-47JXY 60-69 years, female 20.6
GTEX-XOT4-0726-SM-4GIAW 60-69 years, female 20.6
GTEX-13O3P-0826-SM-5L3DH 50-59 years, male 20.5
GTEX-ZUA1-1526-SM-59HLS 40-49 years, male 20.5
GTEX-1192X-2326-SM-5987X 50-59 years, male 20.4
GTEX-13QIC-2326-SM-5LU5N 60-69 years, female 20.4
GTEX-QEG5-0726-SM-4R1JQ 20-29 years, male 20.4
GTEX-S341-1526-SM-4AD6K 40-49 years, female 20.4
GTEX-U3ZN-1926-SM-4DXSG 30-39 years, female 20.4
GTEX-ZY6K-1626-SM-5GZWV 50-59 years, male 20.4
GTEX-139T8-0826-SM-5L3DE 60-69 years, male 20.3
GTEX-T6MN-0726-SM-32PML 50-59 years, male 20.3
GTEX-T6MO-0326-SM-32QOK 40-49 years, female 20.3
GTEX-Y3IK-2326-SM-4WWDT 50-59 years, female 20.3
GTEX-XUW1-2326-SM-4BOO5 50-59 years, female 20.2
GTEX-13CF3-2126-SM-5IFJP 60-69 years, female 20.1
GTEX-13W3W-1226-SM-5LU4H 60-69 years, female 20.1
GTEX-T5JW-2026-SM-4DM63 20-29 years, female 20.1
GTEX-X261-0626-SM-3NMD9 50-59 years, male 20.1
GTEX-Y5LM-1726-SM-4VDSX 40-49 years, female 20.1
GTEX-YFC4-1426-SM-5IFJG 40-49 years, female 20.1
GTEX-ZPIC-1126-SM-5BC7F 40-49 years, female 20.1
GTEX-11WQK-2426-SM-5GU5C 50-59 years, male 20.0
GTEX-145ME-1526-SM-5Q5F2 40-49 years, female 20.0
GTEX-ZVT4-1026-SM-57WC4 50-59 years, female 20.0
GTEX-11DZ1-0326-SM-5N9BN 50-59 years, male 19.8
GTEX-12ZZX-1126-SM-5EGKB 40-49 years, female 19.8
GTEX-S4P3-1326-SM-4AD6V 50-59 years, female 19.8
GTEX-13OW5-2226-SM-5L3HC 60-69 years, male 19.7
GTEX-144GM-0926-SM-5O994 20-29 years, male 19.7
GTEX-13W46-0826-SM-5LU3H 50-59 years, male 19.6
GTEX-ZC5H-2626-SM-5J2MG 40-49 years, female 19.6
GTEX-ZDTT-2126-SM-5S2OJ 60-69 years, male 19.5
GTEX-11LCK-2426-SM-5HL5F 30-39 years, male 19.4
GTEX-1269C-2426-SM-5FQSN 60-69 years, female 19.4
GTEX-11EI6-0626-SM-5985T 60-69 years, male 19.3
GTEX-Q2AG-0326-SM-48U1O 40-49 years, female 19.3
GTEX-Y5V6-2126-SM-4WWFX 60-69 years, male 19.3
GTEX-1117F-2826-SM-5GZXL 60-69 years, female 19.2
GTEX-13O3Q-2226-SM-5KM4O 50-59 years, male 19.2
GTEX-147F4-2826-SM-5NQBN 50-59 years, male 19.2
GTEX-11GS4-2126-SM-5A5KR 60-69 years, male 19.1
GTEX-UPK5-2326-SM-3P5Z8 40-49 years, male 19.1
GTEX-XUJ4-1926-SM-4BOOV 60-69 years, female 19.1
GTEX-ZWKS-2826-SM-5NQ74 30-39 years, male 19.1
GTEX-ZYT6-0126-SM-5E45J 30-39 years, male 19.1
GTEX-133LE-1726-SM-5K7VQ 20-29 years, female 19.0
GTEX-145MN-1926-SM-5SIAI 30-39 years, male 18.9
GTEX-12BJ1-1826-SM-5HL9N 60-69 years, male 18.8
GTEX-QMRM-1626-SM-4R1KV 50-59 years, male 18.8
GTEX-11EQ9-1826-SM-5Q5AJ 30-39 years, male 18.7
GTEX-11OF3-1926-SM-59889 60-69 years, male 18.7
GTEX-UTHO-1026-SM-3GAF7 60-69 years, male 18.7
GTEX-Y3I4-1526-SM-4TT7K 50-59 years, male 18.7
GTEX-ZLV1-1426-SM-4WWES 60-69 years, female 18.6
GTEX-ZYFC-0826-SM-5E44K 50-59 years, male 18.6
GTEX-ZYWO-2326-SM-5GZY4 40-49 years, female 18.6
GTEX-13D11-1026-SM-5IJFB 50-59 years, female 18.5
GTEX-11DXY-2326-SM-5GICW 60-69 years, male 18.4
GTEX-139TU-0626-SM-5KM3X 60-69 years, male 18.3
GTEX-TKQ1-0226-SM-33HB5 30-39 years, male 18.2
GTEX-YJ8O-2226-SM-5IFHW 40-49 years, female 18.2
GTEX-1314G-1226-SM-5BC6D 30-39 years, male 18.1
GTEX-11ONC-2126-SM-5HL6E 60-69 years, male 18.0
GTEX-139T6-1626-SM-5PNYZ 50-59 years, male 18.0
GTEX-WYBS-0926-SM-3NM94 60-69 years, female 18.0
GTEX-13OW8-0226-SM-5K7UP 60-69 years, male 17.9
GTEX-ZDYS-1126-SM-5K7UB 50-59 years, male 17.8
GTEX-ZU9S-1926-SM-5NQBP 30-39 years, male 17.8
GTEX-11DXW-0626-SM-5N9ER 40-49 years, male 17.7
GTEX-QEL4-2126-SM-447AE 50-59 years, male 17.7
GTEX-S4UY-0726-SM-4AD6X 40-49 years, female 17.7
GTEX-VUSG-2226-SM-4KKZO 50-59 years, male 17.7
GTEX-ZAJG-0626-SM-5HL8X 50-59 years, female 17.7
GTEX-13CF2-2026-SM-5K7VI 60-69 years, male 17.6
GTEX-WOFL-0826-SM-3MJG1 60-69 years, male 17.6
GTEX-WRHU-0326-SM-3MJFY 50-59 years, female 17.6
GTEX-YEC3-1026-SM-5IFI5 50-59 years, male 17.6
GTEX-YFCO-1826-SM-4W1YH 40-49 years, male 17.6
GTEX-R53T-1526-SM-48FEK 50-59 years, female 17.5
GTEX-Y114-2026-SM-4TT7L 50-59 years, female 17.5
GTEX-ZTTD-1026-SM-51MRD 50-59 years, male 17.5
GTEX-ZVZQ-0826-SM-51MRF 60-69 years, female 17.5
GTEX-ZYW4-0826-SM-5GIDG 60-69 years, male 17.5
GTEX-11WQC-1726-SM-5GU4W 60-69 years, male 17.3
GTEX-S7SE-0826-SM-4AT4D 50-59 years, male 17.3
GTEX-11DXZ-1926-SM-5GZZL 50-59 years, male 17.2
GTEX-132AR-0826-SM-5EGK6 50-59 years, female 17.2
GTEX-S32W-2026-SM-4AD6E 50-59 years, female 17.2
GTEX-WI4N-1426-SM-3LK7H 40-49 years, female 17.2
GTEX-X15G-1626-SM-3NMB3 50-59 years, female 17.2
GTEX-Y111-2026-SM-4SOJA 50-59 years, male 17.1
GTEX-11I78-2226-SM-5PNYA 50-59 years, female 17.0
GTEX-12KS4-0126-SM-5Q5A5 30-39 years, male 17.0
GTEX-11EMC-2026-SM-5A5JV 60-69 years, female 16.9
GTEX-QVJO-1826-SM-447C9 60-69 years, female 16.9
GTEX-Y9LG-1426-SM-5IFJZ 30-39 years, male 16.8
GTEX-ZZ64-1226-SM-5E43R 20-29 years, male 16.7
GTEX-1313W-0826-SM-5EQ4T 50-59 years, female 16.6
GTEX-131XW-0726-SM-5EGK3 50-59 years, female 16.6
GTEX-132NY-0826-SM-5K7Y7 60-69 years, male 16.6
GTEX-13O61-1826-SM-5KM4I 60-69 years, male 16.6
GTEX-14753-2426-SM-5LU8U 60-69 years, male 16.5
GTEX-RU72-0626-SM-46MUI 50-59 years, female 16.5
GTEX-11PRG-0826-SM-5EQ6A 50-59 years, male 16.4
GTEX-REY6-2426-SM-48FF5 60-69 years, male 16.4
GTEX-ZAB4-2526-SM-5HL8M 40-49 years, male 16.4
GTEX-131YS-0626-SM-5EGKL 60-69 years, female 16.3
GTEX-13PVQ-1026-SM-5KM3M 50-59 years, male 16.3
GTEX-144GL-2026-SM-5LU3O 50-59 years, male 16.3
GTEX-T5JC-2126-SM-32PMO 20-29 years, male 16.3
GTEX-XGQ4-0926-SM-4AT4U 50-59 years, male 16.2
GTEX-11ZUS-0826-SM-5FQUY 30-39 years, male 16.1
GTEX-13FHO-0826-SM-5L3E8 60-69 years, male 16.1
GTEX-14E6E-1326-SM-5S2NR 30-39 years, male 16.1
GTEX-R3RS-0626-SM-48FE1 40-49 years, female 16.1
GTEX-XV7Q-2326-SM-4BRVZ 40-49 years, female 16.1
GTEX-1399U-1826-SM-5PNZ1 50-59 years, female 16.0
GTEX-T2IS-1526-SM-32QPR 20-29 years, female 16.0
GTEX-13FTW-1426-SM-5LZWZ 40-49 years, male 15.9
GTEX-145MO-0826-SM-5NQBL 60-69 years, male 15.8
GTEX-R55D-0826-SM-48FEA 50-59 years, male 15.8
GTEX-13N1W-0626-SM-5MR4U 70-79 years, male 15.7
GTEX-13PL6-2926-SM-5L3I2 40-49 years, female 15.7
GTEX-X4XY-0926-SM-4E3JD 60-69 years, male 15.7
GTEX-13NZB-2126-SM-5MR4Y 30-39 years, male 15.6
GTEX-RUSQ-2026-SM-4GIAK 50-59 years, male 15.6
GTEX-13FTX-1126-SM-5N9EN 20-29 years, female 15.5
GTEX-11ZTT-2326-SM-5EQLG 60-69 years, female 15.4
GTEX-13NZ9-1026-SM-5MR5K 50-59 years, male 15.4
GTEX-117YX-1426-SM-5H12H 50-59 years, male 15.3
GTEX-11NSD-0926-SM-5N9DR 20-29 years, male 15.3
GTEX-S4Q7-1126-SM-4AD6R 20-29 years, male 15.3
GTEX-XMD1-0826-SM-4AT52 60-69 years, male 15.2
GTEX-ZQUD-1926-SM-51MSA 30-39 years, male 15.0
GTEX-YB5K-1626-SM-5IFIN 40-49 years, female 14.9
GTEX-ZVTK-0326-SM-51MRR 20-29 years, male 14.9
GTEX-WY7C-2726-SM-3NB3P 50-59 years, male 14.8
GTEX-13O3O-0826-SM-5K7WE 60-69 years, female 14.7
GTEX-SE5C-2126-SM-4BRUJ 40-49 years, female 14.7
GTEX-11O72-2126-SM-5N9FO 40-49 years, male 14.5
GTEX-XMD2-0926-SM-4WWEF 60-69 years, female 14.5
GTEX-ZVT2-1826-SM-5NQ8W 50-59 years, female 14.5
GTEX-ZDXO-0126-SM-5S2ND 60-69 years, male 14.2
GTEX-ZLFU-2126-SM-4WWEV 40-49 years, male 14.2
GTEX-XQ8I-2426-SM-4WAXY 50-59 years, male 14.1
GTEX-Y8E4-1626-SM-5S2MW 40-49 years, male 14.1
GTEX-ZQG8-0726-SM-5P9H9 60-69 years, female 14.0
GTEX-XQ3S-1326-SM-4BOPQ 20-29 years, male 13.9
GTEX-PSDG-1626-SM-48TCQ 50-59 years, male 13.6
GTEX-YB5E-1726-SM-5IFJ3 40-49 years, male 13.3
GTEX-U412-1826-SM-4DXTJ 60-69 years, male 13.2
GTEX-S33H-0326-SM-4AD6N 30-39 years, male 12.9
GTEX-11P82-1326-SM-5HL62 20-29 years, male 12.7
GTEX-145LT-0726-SM-5S2VM 40-49 years, male 12.7
GTEX-ZT9W-2026-SM-51MRA 50-59 years, male 12.7
GTEX-13S86-1226-SM-5S2OA 40-49 years, male 12.2
GTEX-XMK1-1126-SM-4IHJ8 40-49 years, male 11.8
GTEX-U8XE-0826-SM-4E3J1 30-39 years, male 11.2
GTEX-11TT1-2126-SM-5GU5Y 20-29 years, male 10.9
GTEX-14AS3-1626-SM-5S2OY 40-49 years, female 10.2
GTEX-XYKS-1326-SM-4BRUN 60-69 years, female 10.1
GTEX-14ABY-2126-SM-5QGQZ 50-59 years, male 7.7
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

42.3

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 42.3
FF:10080-102A8 77 years, female 42.3

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.