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ARID1B

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:13.0TPM
GTEx:6.1RPKM
FANTOM5:67.5Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
 

Antibody staining

Antibody HPA016511

  

Endothelial cells

 Medium  

Glandular cells

 Medium  
 
 
 

COLON - HPA RNA-seq

Average TPM

13.0
overview Male, age 54 Sample 1
TPM: 16.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 15.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 11.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 14.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 8.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 11.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 13.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 11.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 13
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 11.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 16
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 15.3
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 9.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

6.1

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 6.9
Samples: 149

Max RPKM: 9.9
Min RPKM: 4.1
Std RPKM: 0.9
Median RPKM: 6.7
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 9.9
GTEX-12WSG-2426-SM-5EQLZ 50-59 years, female 9.8
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 9.6
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 9.4
GTEX-ZAB5-1426-SM-5HL9D 50-59 years, male 8.8
GTEX-11PRG-2026-SM-5GU5F 50-59 years, male 8.5
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 8.5
GTEX-1399R-2126-SM-5K7WZ 30-39 years, male 8.4
GTEX-13O61-1526-SM-5KM3P 60-69 years, male 8.4
GTEX-ZLV1-1326-SM-4WWER 60-69 years, female 8.4
Show all
Colon - Transverse
RPKM: 5.5
Samples: 196

Max RPKM: 9.4
Min RPKM: 2.2
Std RPKM: 1.3
Median RPKM: 5.3
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 9.4
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 8.7
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 8.5
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 8.2
GTEX-12WSL-1626-SM-5GCMU 50-59 years, male 8.1
GTEX-12KS4-2426-SM-5LU8P 30-39 years, male 8.0
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 8.0
GTEX-S341-1426-SM-4AD6U 40-49 years, female 8.0
GTEX-117YX-0826-SM-5H11J 50-59 years, male 7.9
GTEX-T6MO-0826-SM-4DM51 40-49 years, female 7.9
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

67.5

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 67.5
FF:10014-101C5 62,83,84 years, mixed 67.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.