Fields »
ABOUT
HELP
BLOG
PKP2

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:49.7TPM
GTEx:8.6RPKM
FANTOM5:54.6Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:High
Glandular cells:Medium
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA014314

  

Endothelial cells

 High  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 Not detected  
 
 

COLON - HPA RNA-seq

Average TPM

49.7
overview Male, age 54 Sample 1
TPM: 51.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 44.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 49.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 64
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 26.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 47.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 64.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 49.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 35.1
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 69.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 62
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 54.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 27.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

8.6

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 0.6
Samples: 149

Max RPKM: 7.2
Min RPKM: 0.0
Std RPKM: 1.0
Median RPKM: 0.3
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 7.2
GTEX-1211K-1826-SM-5EGJ2 60-69 years, female 5.4
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 5.1
GTEX-11ONC-1926-SM-5GU75 60-69 years, male 4.6
GTEX-XBED-1726-SM-47JYO 60-69 years, male 4.3
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 4.1
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 3.4
GTEX-V955-1726-SM-4JBHF 60-69 years, male 3.1
GTEX-11EQ9-1526-SM-5PNY7 30-39 years, male 1.6
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 1.3
Show all
Colon - Transverse
RPKM: 14.7
Samples: 196

Max RPKM: 41.6
Min RPKM: 0.1
Std RPKM: 11.3
Median RPKM: 16.2
GTEX-ZYWO-1626-SM-5E44H 40-49 years, female 41.6
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 40.7
GTEX-ZF2S-1926-SM-4WWAN 50-59 years, female 40.6
GTEX-11P82-1026-SM-5BC5J 20-29 years, male 38.7
GTEX-139YR-2126-SM-5KM11 50-59 years, male 36.9
GTEX-S4Q7-0826-SM-4AD5E 20-29 years, male 33.9
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 33.7
GTEX-XMK1-1726-SM-4B64Z 40-49 years, male 33.6
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 33.5
GTEX-U4B1-1126-SM-4DXV3 40-49 years, male 33.5
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

54.6

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 54.6
FF:10014-101C5 62,83,84 years, mixed 54.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.