Fields »
ABOUT
HELP
BLOG
SLC2A3

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:8.5TPM
GTEx:21.9RPKM
FANTOM5:53.2Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Low
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA006539

  

Antibody CAB002763

  

Endothelial cells

 Not detected   Not detected  

Glandular cells

 Low   Medium  

Peripheral nerve/ganglion

 Low   Medium  
   
   
   

COLON - HPA RNA-seq

Average TPM

8.5
overview Male, age 54 Sample 1
TPM: 7.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 5.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 3.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 13.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 5.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 24.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 4.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 2.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 16.3
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 5.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 8.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 6
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 8
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

21.9

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 26.9
Samples: 149

Max RPKM: 381.2
Min RPKM: 2.6
Std RPKM: 46.7
Median RPKM: 14.8
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 381.2
GTEX-ZAB4-2426-SM-5HL8A 40-49 years, male 286.8
GTEX-12ZZW-2426-SM-5DUWE 50-59 years, male 257.9
GTEX-14C39-1626-SM-5S2P4 40-49 years, male 192.2
GTEX-11PRG-2026-SM-5GU5F 50-59 years, male 101.6
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 83.9
GTEX-145LS-2926-SM-5O99G 60-69 years, female 82.4
GTEX-11ZU8-1126-SM-5EQ5K 60-69 years, male 80.9
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 70.6
GTEX-ZYY3-2226-SM-5E45A 60-69 years, female 59.2
Show all
Colon - Transverse
RPKM: 18.1
Samples: 196

Max RPKM: 893.4
Min RPKM: 1.2
Std RPKM: 65.4
Median RPKM: 5.7
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 893.4
GTEX-13O3P-2326-SM-5KM55 50-59 years, male 130.0
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 86.5
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 83.1
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 82.0
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 75.4
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 75.4
GTEX-145LS-2726-SM-5Q5D8 60-69 years, female 73.9
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 66.9
GTEX-14BMV-2426-SM-5S2PP 50-59 years, male 61.9
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

53.2

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 53.2
FF:10014-101C5 62,83,84 years, mixed 53.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.