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Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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MTMR1
  • TISSUE

  • CELL

  • PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

GENERAL INFORMATION

Gene name

MTMR1

Gene description

Myotubularin related protein 1

Protein class

Enzymes
Plasma proteins
Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

10
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Expressed in all
HPA (cell line):Expressed in all
HPA (normal tissue):Expressed in all

Protein evidence

Evidence at protein level

Protein expression
normal tissue

General cytoplasmic and nuclear expression.

ANTIBODY IHC RELIABILITY

Data reliability
description

Antibody staining mainly consistent with RNA expression data. Pending external verification.

Reliability score

Approved based on 1 antibody.
HPA018502
SHOW MORE

PROGNOSTIC SUMMARY

Gene product is not prognostic.
Show all

RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Expressed in all

PROTEIN EXPRESSION

Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer
Liver cancer

STAINING SUMMARY

HPA018502

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Several cases of colorectal and breast cancers showed strong cytoplasmic and/or nuclear staining. Several endometrial, lung and liver cancers were negative. A majority of the remaining malignant cells showed weak to moderate staining.

GENE INFORMATION

Gene name

MTMR1

Synonyms

Description

Myotubularin related protein 1 (HGNC Symbol)

Entrez gene summary

This gene encodes a member of the myotubularin related family of proteins. Members of this family contain the consensus sequence for the active site of protein tyrosine phosphatases. Alternatively spliced variants have been described but their biological validity has not been determined. [provided by RefSeq, Jul 2008]

Chromosome

X

Cytoband

q28

Chromosome location (bp)

150692971 - 150765103

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000063601 (version 83.38)

Entrez gene

8776

UniProt

Q13613 (UniProt - Evidence at protein level)

neXtProt

NX_Q13613

Antibodypedia

MTMR1 antibodies

PROTEIN BROWSER

MTMR1-002
MTMR1-005
MTMR1-006
MTMR1-007
MTMR1-008
MTMR1-009
MTMR1-010
MTMR1-012
MTMR1-013
MTMR1-201

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

MTMR1-002
ENSP00000414178
ENST00000445323
F8WA39 [Direct mapping]
Myotubularin-related protein 1
Show all
   Phobius predicted membrane proteins
   THUMBUP predicted membrane proteins
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004438 [phosphatidylinositol-3-phosphatase activity]
GO:0004725 [protein tyrosine phosphatase activity]
GO:0005737 [cytoplasm]
GO:0005886 [plasma membrane]
GO:0016311 [dephosphorylation]
GO:0016791 [phosphatase activity]
GO:0035335 [peptidyl-tyrosine dephosphorylation]
GO:0046856 [phosphatidylinositol dephosphorylation]
GO:0052629 [phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity]
Show all
673 aa
75.7 kDa
No 0
MTMR1-005
ENSP00000390736
ENST00000429965
F8W764 [Direct mapping]
Myotubularin-related protein 1
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004438 [phosphatidylinositol-3-phosphatase activity]
GO:0046856 [phosphatidylinositol dephosphorylation]
GO:0052629 [phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity]
Show all
87 aa
9.6 kDa
No 0
MTMR1-006
ENSP00000389884
ENST00000438018
H7BZJ1 [Direct mapping]
Myotubularin-related protein 1
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004438 [phosphatidylinositol-3-phosphatase activity]
GO:0046856 [phosphatidylinositol dephosphorylation]
GO:0052629 [phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity]
Show all
132 aa
14.8 kDa
No 0
MTMR1-007
ENSP00000414925
ENST00000436701
H7C406 [Direct mapping]
Myotubularin-related protein 1
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004438 [phosphatidylinositol-3-phosphatase activity]
GO:0046856 [phosphatidylinositol dephosphorylation]
GO:0052629 [phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity]
Show all
149 aa
16.8 kDa
No 0
MTMR1-008
ENSP00000436957
ENST00000490316
E9PPP8 [Direct mapping]
Myotubularin-related protein 1
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004438 [phosphatidylinositol-3-phosphatase activity]
GO:0046856 [phosphatidylinositol dephosphorylation]
GO:0052629 [phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity]
Show all
185 aa
19.5 kDa
No 0
MTMR1-009
ENSP00000404599
ENST00000439546
F8W8S8 [Direct mapping]
Myotubularin-related protein 1
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004438 [phosphatidylinositol-3-phosphatase activity]
GO:0046856 [phosphatidylinositol dephosphorylation]
GO:0052629 [phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity]
Show all
90 aa
10 kDa
No 0
MTMR1-010
ENSP00000405946
ENST00000434699
F8W764 [Direct mapping]
Myotubularin-related protein 1
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004438 [phosphatidylinositol-3-phosphatase activity]
GO:0046856 [phosphatidylinositol dephosphorylation]
GO:0052629 [phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity]
Show all
87 aa
9.6 kDa
No 0
MTMR1-012
ENSP00000431992
ENST00000493995
E9PIH9 [Direct mapping]
Myotubularin-related protein 1
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004438 [phosphatidylinositol-3-phosphatase activity]
GO:0046856 [phosphatidylinositol dephosphorylation]
GO:0052629 [phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity]
Show all
147 aa
16.7 kDa
No 0
MTMR1-013
ENSP00000359417
ENST00000370390
Q13613 [Direct mapping]
Myotubularin-related protein 1
Show all
Enzymes
   ENZYME proteins
   Hydrolases
   Phobius predicted membrane proteins
   THUMBUP predicted membrane proteins
Predicted intracellular proteins
Plasma proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004438 [phosphatidylinositol-3-phosphatase activity]
GO:0004725 [protein tyrosine phosphatase activity]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005886 [plasma membrane]
GO:0006644 [phospholipid metabolic process]
GO:0006661 [phosphatidylinositol biosynthetic process]
GO:0016311 [dephosphorylation]
GO:0016791 [phosphatase activity]
GO:0035335 [peptidyl-tyrosine dephosphorylation]
GO:0044281 [small molecule metabolic process]
GO:0046856 [phosphatidylinositol dephosphorylation]
GO:0052629 [phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity]
Show all
665 aa
74.7 kDa
No 0
MTMR1-201
ENSP00000445281
ENST00000542156
Q8NEC6 [Direct mapping]
MTMR1 protein; Myotubularin related protein 1, isoform CRA_b; Myotubularin-related protein 1
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004438 [phosphatidylinositol-3-phosphatase activity]
GO:0046856 [phosphatidylinositol dephosphorylation]
GO:0052629 [phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity]
Show all
363 aa
39.8 kDa
No 0

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