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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:42.6TPM
GTEx:14.5RPKM
FANTOM5:50.7Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Not detected
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA006493

  

Adipocytes

 Low  

Fibroblasts

 Not detected  

Peripheral nerve

 Not detected  
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Low
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA006493

  

Adipocytes

 Low  

Fibroblasts

 Low  

Peripheral nerve

 Not detected  
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

42.6
N/A Female, age 80 Sample 1
TPM: 23.7
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 72.9
N/A Female, age 57 Sample 3
TPM: 64.1
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 19.6
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 32.5
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

14.5

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 15.9
Samples: 350

Max RPKM: 133.5
Min RPKM: 2.6
Std RPKM: 14.8
Median RPKM: 11.7
GTEX-OHPN-0226-SM-48TBV 60-69 years, female 133.5
GTEX-11XUK-2126-SM-5EQLR 40-49 years, female 132.5
GTEX-WY7C-2426-SM-3NB2V 50-59 years, male 100.5
GTEX-QLQW-1226-SM-2S1Q9 30-39 years, male 70.4
GTEX-U8XE-0426-SM-3DB91 30-39 years, male 68.8
GTEX-QDVJ-1826-SM-2S1P3 50-59 years, male 68.0
GTEX-ZYWO-2526-SM-5GIDM 40-49 years, female 66.7
GTEX-11TUW-2626-SM-5EQKZ 60-69 years, male 62.0
GTEX-WVLH-0226-SM-3MJG6 50-59 years, male 59.2
GTEX-XBED-2326-SM-47JYR 60-69 years, male 56.8
Show all
Adipose - Visceral (Omentum)
RPKM: 12.3
Samples: 227

Max RPKM: 235.3
Min RPKM: 1.2
Std RPKM: 18.1
Median RPKM: 8.0
GTEX-11XUK-1726-SM-5GU61 40-49 years, female 235.3
GTEX-13FH7-1926-SM-5J2OL 50-59 years, female 63.7
GTEX-XYKS-1826-SM-4E3JV 60-69 years, female 63.2
GTEX-XXEK-1426-SM-4BRW1 50-59 years, male 60.1
GTEX-1339X-0726-SM-5L3FF 40-49 years, male 56.4
GTEX-WY7C-0926-SM-3NB34 50-59 years, male 52.9
GTEX-13CF3-1126-SM-5LZXB 60-69 years, female 48.4
GTEX-13OW6-2426-SM-5K7WO 50-59 years, male 45.4
GTEX-11I78-0226-SM-5HL6R 50-59 years, female 37.3
GTEX-U8XE-1926-SM-3DB98 30-39 years, male 34.0
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

50.7

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 50.7
FF:10010-101C1 65,65,76 years, mixed 50.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.