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SMARCD1

ESOPHAGUS - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:22.8TPM
GTEx:14.3RPKM
FANTOM5:28.3Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:Medium
 

Antibody staining

Antibody HPA004101

  

Squamous epithelial cells

 Medium  
 
 
 

ESOPHAGUS - HPA RNA-seq

Average TPM

22.8
overview Female, age 70 Sample 1
TPM: 22.5
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38 Sample 2
TPM: 21.6
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76 Sample 3
TPM: 24.4
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

14.3

GTEx sample id

Sample description

RPKM
Esophagus - Mucosa
RPKM: 14.3
Samples: 286

Max RPKM: 29.1
Min RPKM: 8.0
Std RPKM: 3.6
Median RPKM: 13.4
GTEX-13PVQ-1726-SM-5IFF3 50-59 years, male 29.1
GTEX-13O1R-1326-SM-5IJF5 60-69 years, male 27.8
GTEX-WK11-1026-SM-4OOS8 50-59 years, male 26.1
GTEX-12ZZW-1726-SM-5DUVD 50-59 years, male 25.7
GTEX-145LS-1826-SM-5LUAZ 60-69 years, female 23.6
GTEX-YECK-1626-SM-5IFHQ 60-69 years, male 23.5
GTEX-R45C-1226-SM-48FEE 60-69 years, female 23.2
GTEX-Y111-1626-SM-57WCY 50-59 years, male 23.1
GTEX-139TU-1226-SM-5J2NL 60-69 years, male 22.7
GTEX-12WSA-1426-SM-5EGJU 60-69 years, male 22.2
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

28.3

FANTOM5 sample id

Sample description

Tags Per Million
Esophagus
Tags Per Million: 28.3
FF:10015-101C6 68,74,75 years, mixed 28.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.