Tissue expression of ARFGEF1 - Staining in esophagus

ESOPHAGUS - Expression summary

Protein expression

RNA expression

HPA:	17.1	TPM
GTEx:	8.9	RPKM
FANTOM5:	37.1	Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:

High

Antibody staining	Antibody HPA023399	Antibody HPA023822
Squamous epithelial cells	Low	High

ESOPHAGUS - HPA RNA-seq

Average TPM	17.1

Female, age 70

Sample 1
TPM: 14.4

Cell types%

Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45

Male, age 38

Sample 2
TPM: 19

Cell types%

Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20

Male, age 76

Sample 3
TPM: 18.1

Cell types%

Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM	8.9

GTEx sample id

Sample description

RPKM

Esophagus - Mucosa
RPKM: 8.9

Samples: 286

Max RPKM: 12.1
Min RPKM: 5.6
Std RPKM: 1.2
Median RPKM: 8.9

GTEX-133LE-0626-SM-5IFFJ

20-29 years, female

12.1

GTEX-145LT-1126-SM-5LUA1

40-49 years, male

12.0

GTEX-OOBK-0625-SM-3LK5P

40-49 years, male

11.9

GTEX-QV44-1126-SM-4R1KO

50-59 years, male

11.7

GTEX-131XG-1026-SM-5GCMX

50-59 years, female

11.4

GTEX-13D11-1926-SM-5IFGB

50-59 years, female

11.4

GTEX-13RTK-0526-SM-5S2QF

20-29 years, male

11.3

GTEX-144GM-1426-SM-5LU31

20-29 years, male

11.3

GTEX-WFON-0826-SM-4LVMI

40-49 years, male

11.3

GTEX-Y114-0926-SM-4TT7J

50-59 years, female

11.3

Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million	37.1

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 37.1

FF:10015-101C6

68,74,75 years, mixed

37.1