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WIPI1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:36.5TPM
GTEx:14.6RPKM
FANTOM5:26.6Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA007493

  

Antibody CAB037230

  

Endothelial cells

 Low   Medium  

Glandular cells

 High   High  

Peripheral nerve/ganglion

 Medium   Medium  
   
   

COLON - HPA RNA-seq

Average TPM

36.5
overview Male, age 54 Sample 1
TPM: 38.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 16.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 47.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 20.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 30.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 35.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 48.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 32.5
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 44.1
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 46.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 45.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 39.3
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 28.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

14.6

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 9.1
Samples: 149

Max RPKM: 24.9
Min RPKM: 4.2
Std RPKM: 3.1
Median RPKM: 8.7
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 24.9
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 20.3
GTEX-13OVJ-1826-SM-5KM2D 50-59 years, female 19.2
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 18.0
GTEX-XBED-1726-SM-47JYO 60-69 years, male 17.8
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 14.5
GTEX-Y114-1626-SM-4TT7I 50-59 years, female 14.3
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 13.9
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 13.9
GTEX-1211K-1826-SM-5EGJ2 60-69 years, female 13.7
Show all
Colon - Transverse
RPKM: 18.8
Samples: 196

Max RPKM: 38.5
Min RPKM: 5.0
Std RPKM: 7.7
Median RPKM: 18.5
GTEX-XUJ4-2026-SM-4BOOW 60-69 years, female 38.5
GTEX-T5JW-1126-SM-4DM5V 20-29 years, female 38.3
GTEX-WFG7-1526-SM-4LVMG 20-29 years, male 37.8
GTEX-WOFM-2026-SM-4OOSQ 20-29 years, male 36.5
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 35.6
GTEX-13FTW-1826-SM-5IJEN 40-49 years, male 34.0
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 33.2
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 32.8
GTEX-U4B1-1126-SM-4DXV3 40-49 years, male 32.3
GTEX-XBED-1526-SM-4AT5W 60-69 years, male 32.3
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

26.6

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 26.6
FF:10014-101C5 62,83,84 years, mixed 26.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.