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ALPK1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:4.1TPM
GTEx:3.5RPKM
FANTOM5:21.0Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Low
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA027435

  

Antibody HPA027443

  

Endothelial cells

 Low   Medium  

Glandular cells

 Low   Low  

Peripheral nerve/ganglion

 Low   Medium  
   
   
   

COLON - HPA RNA-seq

Average TPM

4.1
overview Male, age 54 Sample 1
TPM: 4.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 3.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 3.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 4.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 2.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 2.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 4.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 4
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 4.9
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 4.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 4.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 4.7
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 5.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

3.5

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 3.3
Samples: 149

Max RPKM: 14.3
Min RPKM: 0.8
Std RPKM: 2.4
Median RPKM: 2.4
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 14.3
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 12.1
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 12.0
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 11.5
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 10.3
GTEX-12WSL-1826-SM-5LZW9 50-59 years, male 10.0
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 9.3
GTEX-11TUW-2326-SM-5EQMO 60-69 years, male 9.0
GTEX-14A5H-1626-SM-5SIAN 60-69 years, male 8.9
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 7.8
Show all
Colon - Transverse
RPKM: 3.6
Samples: 196

Max RPKM: 14.0
Min RPKM: 1.2
Std RPKM: 1.6
Median RPKM: 3.4
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 14.0
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 11.3
GTEX-13O3P-2326-SM-5KM55 50-59 years, male 10.5
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 9.3
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 8.4
GTEX-QLQ7-1126-SM-4R1KN 60-69 years, male 7.5
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 7.2
GTEX-O5YT-1426-SM-3MJHC 20-29 years, male 6.3
GTEX-1211K-1726-SM-5FQUJ 60-69 years, female 5.9
GTEX-XMK1-1726-SM-4B64Z 40-49 years, male 5.6
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

21.0

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 21.0
FF:10014-101C5 62,83,84 years, mixed 21.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.