Tissue expression of PICALM - Staining in breast

BREAST - Expression summary

Protein expression

RNA expression

HPA:	108.2	TPM
GTEx:	70.7	RPKM
FANTOM5:	134.4	Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:	Low
Glandular cells:	High
Myoepithelial cells:	Low

Antibody staining	Antibody HPA019053	Antibody HPA019061
Adipocytes	Medium	Not detected
Glandular cells	High	Low
Myoepithelial cells	Medium	Low

BREAST - HPA RNA-seq

Average TPM	108.2

Female, age 52

Sample 1
TPM: 94.2

Cell types%

Glandular cells: 15
Adipocytes: 5
Other cell types: 80

Female, age 80

Sample 2
TPM: 116.8

Cell types%

Glandular cells: 5
Adipocytes: 15
Other cell types: 80

Female, age 47

Sample 3
TPM: 91.8

Cell types%

Glandular cells: 5
Adipocytes: 5
Other cell types: 90

Female, age 38

Sample 4
TPM: 130

Cell types%

Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM	70.7

GTEx sample id

Sample description

RPKM

Breast - Mammary Tissue
RPKM: 70.7

Samples: 214

Max RPKM: 176.4
Min RPKM: 23.9
Std RPKM: 23.5
Median RPKM: 66.0

GTEX-14753-2426-SM-5LU8U

60-69 years, male

176.4

GTEX-11WQK-2426-SM-5GU5C

50-59 years, male

155.8

GTEX-13N1W-0626-SM-5MR4U

70-79 years, male

147.2

GTEX-13PVQ-1026-SM-5KM3M

50-59 years, male

137.5

GTEX-S7SE-0826-SM-4AT4D

50-59 years, male

131.2

GTEX-WOFL-0826-SM-3MJG1

60-69 years, male

129.7

GTEX-11TUW-1826-SM-5BC5D

60-69 years, male

127.2

GTEX-12WSM-1726-SM-5BC6J

60-69 years, male

127.2

GTEX-145ME-1526-SM-5Q5F2

40-49 years, female

125.0

GTEX-11DZ1-0326-SM-5N9BN

50-59 years, male

122.8

Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million	134.4

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 134.4

FF:10080-102A8

77 years, female

134.4