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TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:30.1TPM
GTEx:53.5RPKM
FANTOM5:101.0Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:Low
Myoepithelial cells:Not detected
 

Antibody staining

Antibody HPA004817

 

Antibody HPA061417

 

Antibody CAB013460

 

Adipocytes

Not detected   Not detected   Not detected  

Glandular cells

Not detected   Not detected   Low  

Myoepithelial cells

Not detected   Not detected   Not detected  
     
     
     

BREAST - HPA RNA-seq

Average TPM

30.1

overview Female, age 52 Sample 1
TPM: 20.1
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80 Sample 2
TPM: 52.2
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47 Sample 3
TPM: 36.6
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38 Sample 4
TPM: 11.7
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

53.5

GTEx sample id

Sample description

RPKM

Breast - Mammary Tissue
RPKM: 53.5
Samples: 214

Max RPKM: 138.4
Min RPKM: 11.0
Std RPKM: 26.2
Median RPKM: 46.4
GTEX-13N1W-0626-SM-5MR4U 70-79 years, male 138.4
GTEX-1313W-0826-SM-5EQ4T 50-59 years, female 135.6
GTEX-S7SE-0826-SM-4AT4D 50-59 years, male 132.9
GTEX-144GM-0926-SM-5O994 20-29 years, male 130.0
GTEX-13O61-1826-SM-5KM4I 60-69 years, male 126.4
GTEX-U412-1826-SM-4DXTJ 60-69 years, male 124.0
GTEX-13O3Q-2226-SM-5KM4O 50-59 years, male 119.6
GTEX-11WQK-2426-SM-5GU5C 50-59 years, male 118.6
GTEX-14753-2426-SM-5LU8U 60-69 years, male 115.8
GTEX-13W46-0826-SM-5LU3H 50-59 years, male 114.5
GTEX-WOFL-0826-SM-3MJG1 60-69 years, male 114.2
GTEX-XQ8I-2426-SM-4WAXY 50-59 years, male 112.6
GTEX-XMD1-0826-SM-4AT52 60-69 years, male 112.1
GTEX-13PVQ-1026-SM-5KM3M 50-59 years, male 110.4
GTEX-XMD2-0926-SM-4WWEF 60-69 years, female 109.3
GTEX-11O72-2126-SM-5N9FO 40-49 years, male 104.4
GTEX-12KS4-0126-SM-5Q5A5 30-39 years, male 102.2
GTEX-11OF3-1926-SM-59889 60-69 years, male 100.4
GTEX-12WSM-1726-SM-5BC6J 60-69 years, male 98.4
GTEX-ZF3C-2326-SM-5S2MZ 50-59 years, female 97.9
GTEX-12BJ1-1826-SM-5HL9N 60-69 years, male 93.3
GTEX-ZA64-1526-SM-5CVMD 20-29 years, male 92.2
GTEX-11EI6-0626-SM-5985T 60-69 years, male 90.1
GTEX-T2YK-2226-SM-32QPT 50-59 years, male 88.8
GTEX-144GL-2026-SM-5LU3O 50-59 years, male 86.2
GTEX-111YS-1926-SM-5GICC 60-69 years, male 84.6
GTEX-QEG5-0726-SM-4R1JQ 20-29 years, male 84.3
GTEX-13O3P-0826-SM-5L3DH 50-59 years, male 84.2
GTEX-11GSO-1926-SM-5A5K3 60-69 years, male 83.2
GTEX-WI4N-1426-SM-3LK7H 40-49 years, female 80.5
GTEX-UTHO-1026-SM-3GAF7 60-69 years, male 78.4
GTEX-11DZ1-0326-SM-5N9BN 50-59 years, male 77.8
GTEX-UPK5-2326-SM-3P5Z8 40-49 years, male 77.7
GTEX-13NZ9-1026-SM-5MR5K 50-59 years, male 76.5
GTEX-139T6-1626-SM-5PNYZ 50-59 years, male 75.5
GTEX-RUSQ-2026-SM-4GIAK 50-59 years, male 75.3
GTEX-QVJO-1826-SM-447C9 60-69 years, female 73.6
GTEX-13OW8-0226-SM-5K7UP 60-69 years, male 73.5
GTEX-X261-0626-SM-3NMD9 50-59 years, male 73.0
GTEX-ZVT4-1026-SM-57WC4 50-59 years, female 71.9
GTEX-14E6E-1326-SM-5S2NR 30-39 years, male 71.7
GTEX-REY6-2426-SM-48FF5 60-69 years, male 70.7
GTEX-1269C-2426-SM-5FQSN 60-69 years, female 70.1
GTEX-RU72-0626-SM-46MUI 50-59 years, female 69.3
GTEX-ZYFC-0826-SM-5E44K 50-59 years, male 67.7
GTEX-S4P3-1326-SM-4AD6V 50-59 years, female 66.4
GTEX-12WSK-2226-SM-5GCO5 40-49 years, female 66.2
GTEX-R55F-1726-SM-2TF4R 50-59 years, male 66.2
GTEX-ZWKS-2826-SM-5NQ74 30-39 years, male 66.2
GTEX-R3RS-0626-SM-48FE1 40-49 years, female 65.9
GTEX-ZU9S-1926-SM-5NQBP 30-39 years, male 65.8
GTEX-11DXW-0626-SM-5N9ER 40-49 years, male 65.7
GTEX-Q2AG-0326-SM-48U1O 40-49 years, female 65.7
GTEX-ZLFU-2126-SM-4WWEV 40-49 years, male 65.7
GTEX-YJ8O-2226-SM-5IFHW 40-49 years, female 64.1
GTEX-ZT9W-2026-SM-51MRA 50-59 years, male 64.0
GTEX-ZV7C-1826-SM-5NQ83 50-59 years, male 63.8
GTEX-Y114-2026-SM-4TT7L 50-59 years, female 63.6
GTEX-ZVE2-1226-SM-5NQ8R 50-59 years, male 62.4
GTEX-13CF3-2126-SM-5IFJP 60-69 years, female 61.7
GTEX-PSDG-1626-SM-48TCQ 50-59 years, male 61.3
GTEX-1314G-1226-SM-5BC6D 30-39 years, male 61.2
GTEX-YEC3-1026-SM-5IFI5 50-59 years, male 60.9
GTEX-ZZ64-1226-SM-5E43R 20-29 years, male 59.9
GTEX-13OW5-2226-SM-5L3HC 60-69 years, male 59.3
GTEX-WRHU-0326-SM-3MJFY 50-59 years, female 59.2
GTEX-ZYW4-0826-SM-5GIDG 60-69 years, male 59.1
GTEX-Y9LG-1426-SM-5IFJZ 30-39 years, male 57.9
GTEX-11TUW-1826-SM-5BC5D 60-69 years, male 57.4
GTEX-139T8-0826-SM-5L3DE 60-69 years, male 57.4
GTEX-117XS-1926-SM-5GICO 60-69 years, male 56.8
GTEX-ZAJG-0626-SM-5HL8X 50-59 years, female 56.5
GTEX-146FH-0826-SM-5SI8T 50-59 years, female 56.3
GTEX-11GS4-2126-SM-5A5KR 60-69 years, male 56.0
GTEX-147F4-2826-SM-5NQBN 50-59 years, male 56.0
GTEX-12WSN-1326-SM-5GCNT 40-49 years, male 55.8
GTEX-13O3O-0826-SM-5K7WE 60-69 years, female 55.5
GTEX-13FTX-1126-SM-5N9EN 20-29 years, female 54.5
GTEX-XV7Q-2326-SM-4BRVZ 40-49 years, female 54.5
GTEX-13113-1726-SM-5GCOO 60-69 years, female 53.8
GTEX-13FHO-0826-SM-5L3E8 60-69 years, male 53.8
GTEX-XUW1-2326-SM-4BOO5 50-59 years, female 53.6
GTEX-TKQ2-1826-SM-33HB2 50-59 years, male 53.5
GTEX-139TU-0626-SM-5KM3X 60-69 years, male 53.3
GTEX-ZV6S-1826-SM-5NQ8D 40-49 years, female 53.1
GTEX-ZF29-1926-SM-5S2P1 60-69 years, female 53.0
GTEX-ZTX8-1226-SM-4YCE9 20-29 years, male 52.4
GTEX-ZDTT-2126-SM-5S2OJ 60-69 years, male 52.3
GTEX-13NZB-2126-SM-5MR4Y 30-39 years, male 51.8
GTEX-S32W-2026-SM-4AD6E 50-59 years, female 51.6
GTEX-ZY6K-1626-SM-5GZWV 50-59 years, male 51.0
GTEX-ZUA1-1526-SM-59HLS 40-49 years, male 50.6
GTEX-11NV4-2026-SM-5N9DG 60-69 years, male 50.3
GTEX-13QIC-2326-SM-5LU5N 60-69 years, female 50.1
GTEX-R53T-1526-SM-48FEK 50-59 years, female 49.8
GTEX-R55D-0826-SM-48FEA 50-59 years, male 49.3
GTEX-VJWN-0726-SM-3GIJ8 50-59 years, female 49.1
GTEX-WFON-1826-SM-3GILG 40-49 years, male 48.9
GTEX-X4EP-2926-SM-3P5YQ 60-69 years, female 48.9
GTEX-TMMY-0726-SM-33HBE 40-49 years, female 48.5
GTEX-YFCO-1826-SM-4W1YH 40-49 years, male 48.2
GTEX-QMRM-1626-SM-4R1KV 50-59 years, male 47.7
GTEX-WYBS-0926-SM-3NM94 60-69 years, female 47.5
GTEX-ZQUD-1926-SM-51MSA 30-39 years, male 47.5
GTEX-13FTY-2226-SM-5J1ND 40-49 years, female 47.4
GTEX-145MO-0826-SM-5NQBL 60-69 years, male 47.3
GTEX-ZLV1-1426-SM-4WWES 60-69 years, female 46.5
GTEX-1192X-2326-SM-5987X 50-59 years, male 46.2
GTEX-132NY-0826-SM-5K7Y7 60-69 years, male 46.2
GTEX-U8XE-0826-SM-4E3J1 30-39 years, male 46.2
GTEX-12ZZX-1126-SM-5EGKB 40-49 years, female 46.1
GTEX-XUJ4-1926-SM-4BOOV 60-69 years, female 46.1
GTEX-13NZ8-0126-SM-5IJCT 60-69 years, female 46.0
GTEX-WYJK-1326-SM-3NB2T 50-59 years, male 45.5
GTEX-Y8LW-1626-SM-5IFHX 50-59 years, female 45.5
GTEX-11ZUS-0826-SM-5FQUY 30-39 years, male 45.2
GTEX-13S86-1226-SM-5S2OA 40-49 years, male 45.2
GTEX-1117F-2826-SM-5GZXL 60-69 years, female 44.8
GTEX-145ME-1526-SM-5Q5F2 40-49 years, female 44.7
GTEX-QEL4-2126-SM-447AE 50-59 years, male 44.7
GTEX-T2IS-1526-SM-32QPR 20-29 years, female 44.7
GTEX-132Q8-1426-SM-5EGK7 60-69 years, male 44.6
GTEX-11LCK-2426-SM-5HL5F 30-39 years, male 44.4
GTEX-XQ3S-1326-SM-4BOPQ 20-29 years, male 44.0
GTEX-11ONC-2126-SM-5HL6E 60-69 years, male 43.7
GTEX-Y111-2026-SM-4SOJA 50-59 years, male 43.5
GTEX-S4UY-0726-SM-4AD6X 40-49 years, female 43.1
GTEX-U3ZH-1426-SM-4DXSR 30-39 years, male 42.9
GTEX-12WSB-0626-SM-59HJO 60-69 years, female 42.7
GTEX-ZDXO-0126-SM-5S2ND 60-69 years, male 42.6
GTEX-11P82-1326-SM-5HL62 20-29 years, male 42.5
GTEX-1211K-1926-SM-5EQLB 60-69 years, female 42.3
GTEX-TML8-1226-SM-32QON 40-49 years, female 42.3
GTEX-TKQ1-0226-SM-33HB5 30-39 years, male 42.2
GTEX-Y3I4-1526-SM-4TT7K 50-59 years, male 42.2
GTEX-YB5E-1726-SM-5IFJ3 40-49 years, male 42.1
GTEX-ZYWO-2326-SM-5GZY4 40-49 years, female 42.0
GTEX-Y5V5-2126-SM-4WWFO 60-69 years, female 41.6
GTEX-X4XY-0926-SM-4E3JD 60-69 years, male 40.9
GTEX-Y5V6-2126-SM-4WWFX 60-69 years, male 40.9
GTEX-133LE-1726-SM-5K7VQ 20-29 years, female 40.8
GTEX-S4Q7-1126-SM-4AD6R 20-29 years, male 40.7
GTEX-T5JC-2126-SM-32PMO 20-29 years, male 40.7
GTEX-11DXY-2326-SM-5GICW 60-69 years, male 40.0
GTEX-S33H-0326-SM-4AD6N 30-39 years, male 39.9
GTEX-11NSD-0926-SM-5N9DR 20-29 years, male 39.8
GTEX-13W3W-1226-SM-5LU4H 60-69 years, female 39.5
GTEX-145MN-1926-SM-5SIAI 30-39 years, male 38.6
GTEX-WYVS-1726-SM-3NMAY 40-49 years, female 38.3
GTEX-13PL6-2926-SM-5L3I2 40-49 years, female 38.2
GTEX-RWS6-1926-SM-47JXY 60-69 years, female 38.1
GTEX-XBED-1626-SM-47JYN 60-69 years, male 37.7
GTEX-ZVZQ-0826-SM-51MRF 60-69 years, female 37.7
GTEX-1122O-1226-SM-5H113 60-69 years, female 37.4
GTEX-VUSG-2226-SM-4KKZO 50-59 years, male 37.0
GTEX-1399U-1826-SM-5PNZ1 50-59 years, female 36.4
GTEX-T6MO-0326-SM-32QOK 40-49 years, female 36.4
GTEX-13FTW-1426-SM-5LZWZ 40-49 years, male 36.2
GTEX-11TT1-2126-SM-5GU5Y 20-29 years, male 35.9
GTEX-W5X1-2326-SM-3GIL6 40-49 years, female 35.8
GTEX-WY7C-2726-SM-3NB3P 50-59 years, male 35.7
GTEX-117YX-1426-SM-5H12H 50-59 years, male 35.3
GTEX-11P7K-0726-SM-5EGKX 30-39 years, male 35.2
GTEX-ZDYS-1126-SM-5K7UB 50-59 years, male 35.1
GTEX-13N11-1726-SM-5J1OJ 50-59 years, female 34.9
GTEX-ZEX8-2226-SM-57WC6 50-59 years, male 34.7
GTEX-11WQC-1726-SM-5GU4W 60-69 years, male 34.5
GTEX-ZZPU-0626-SM-5E43T 50-59 years, female 34.2
GTEX-11ZTT-2326-SM-5EQLG 60-69 years, female 33.7
GTEX-11EM3-1326-SM-5N9C6 20-29 years, female 33.4
GTEX-145LT-0726-SM-5S2VM 40-49 years, male 33.2
GTEX-11P81-1926-SM-5BC53 30-39 years, female 33.1
GTEX-QDT8-0626-SM-48TYW 30-39 years, female 32.4
GTEX-ZQG8-0726-SM-5P9H9 60-69 years, female 32.3
GTEX-ZC5H-2626-SM-5J2MG 40-49 years, female 32.1
GTEX-UJHI-1426-SM-3DB9C 50-59 years, female 31.4
GTEX-Y5LM-1726-SM-4VDSX 40-49 years, female 31.4
GTEX-ZAB4-2526-SM-5HL8M 40-49 years, male 31.4
GTEX-XGQ4-0926-SM-4AT4U 50-59 years, male 31.2
GTEX-11EMC-2026-SM-5A5JV 60-69 years, female 30.0
GTEX-13D11-1026-SM-5IJFB 50-59 years, female 30.0
GTEX-SIU7-1626-SM-4BRUK 50-59 years, male 29.9
GTEX-YFC4-1426-SM-5IFJG 40-49 years, female 29.8
GTEX-13CF2-2026-SM-5K7VI 60-69 years, male 29.2
GTEX-132AR-0826-SM-5EGK6 50-59 years, female 28.9
GTEX-ZTTD-1026-SM-51MRD 50-59 years, male 28.8
GTEX-11EQ9-1826-SM-5Q5AJ 30-39 years, male 28.5
GTEX-XOT4-0726-SM-4GIAW 60-69 years, female 27.5
GTEX-11DXZ-1926-SM-5GZZL 50-59 years, male 27.4
GTEX-11PRG-0826-SM-5EQ6A 50-59 years, male 27.4
GTEX-ZXES-0826-SM-5E43C 30-39 years, female 27.3
GTEX-Y3IK-2326-SM-4WWDT 50-59 years, female 27.2
GTEX-11I78-2226-SM-5PNYA 50-59 years, female 27.0
GTEX-T5JW-2026-SM-4DM63 20-29 years, female 25.0
GTEX-Y8E4-1626-SM-5S2MW 40-49 years, male 25.0
GTEX-ZF2S-2026-SM-5E461 50-59 years, female 24.8
GTEX-S341-1526-SM-4AD6K 40-49 years, female 24.7
GTEX-ZVT2-1826-SM-5NQ8W 50-59 years, female 24.7
GTEX-ZYT6-0126-SM-5E45J 30-39 years, male 24.3
GTEX-131XW-0726-SM-5EGK3 50-59 years, female 24.1
GTEX-WXYG-2226-SM-4E3IM 50-59 years, female 22.7
GTEX-ZPIC-1126-SM-5BC7F 40-49 years, female 22.6
GTEX-YB5K-1626-SM-5IFIN 40-49 years, female 22.4
GTEX-X15G-1626-SM-3NMB3 50-59 years, female 22.3
GTEX-SE5C-2126-SM-4BRUJ 40-49 years, female 21.8
GTEX-T6MN-0726-SM-32PML 50-59 years, male 21.2
GTEX-14AS3-1626-SM-5S2OY 40-49 years, female 20.1
GTEX-U3ZN-1926-SM-4DXSG 30-39 years, female 19.4
GTEX-XMK1-1126-SM-4IHJ8 40-49 years, male 18.8
GTEX-131YS-0626-SM-5EGKL 60-69 years, female 18.7
GTEX-ZVTK-0326-SM-51MRR 20-29 years, male 17.2
GTEX-XUZC-1626-SM-4BRVP 30-39 years, female 15.6
GTEX-XYKS-1326-SM-4BRUN 60-69 years, female 14.5
GTEX-14ABY-2126-SM-5QGQZ 50-59 years, male 11.0
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

101.0

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 101.0
FF:10080-102A8 77 years, female 101.0

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