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NFKB2

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:11.7TPM
GTEx:20.9RPKM
FANTOM5:28.6Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Low
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA008422

  

Antibody HPA023900

  

Antibody CAB022098

  

Endothelial cells

 Medium   Low   High  

Glandular cells

 Medium   Low   High  

Peripheral nerve/ganglion

 Low   Not detected   High  
     
     
     

COLON - HPA RNA-seq

Average TPM

11.7
overview Male, age 54 Sample 1
TPM: 13.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 9.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 10.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 12.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 14.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 16.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 5.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 5.9
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 14.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 11.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 12.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 16.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

20.9

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 26.7
Samples: 149

Max RPKM: 67.3
Min RPKM: 11.4
Std RPKM: 9.2
Median RPKM: 25.1
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 67.3
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 61.2
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 56.4
GTEX-14A5H-1626-SM-5SIAN 60-69 years, male 53.0
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 51.9
GTEX-13PVQ-2726-SM-5L3H7 50-59 years, male 44.1
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 44.0
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 43.3
GTEX-ZVT3-2826-SM-5GU6A 60-69 years, female 42.4
GTEX-11TUW-2326-SM-5EQMO 60-69 years, male 42.2
Show all
Colon - Transverse
RPKM: 16.5
Samples: 196

Max RPKM: 85.6
Min RPKM: 3.7
Std RPKM: 9.9
Median RPKM: 15.0
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 85.6
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 75.5
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 44.5
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 40.9
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 38.1
GTEX-QLQ7-1126-SM-4R1KN 60-69 years, male 34.7
GTEX-14ICL-1226-SM-5S2RD 30-39 years, male 33.1
GTEX-11GSP-1626-SM-5986N 60-69 years, female 31.2
GTEX-13OW5-2626-SM-5MR3M 60-69 years, male 31.1
GTEX-11ONC-2026-SM-5HL61 60-69 years, male 30.6
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

28.6

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 28.6
FF:10014-101C5 62,83,84 years, mixed 28.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.