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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:20.3TPM
GTEx:17.9RPKM
FANTOM5:26.6Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Low
 

Antibody staining

Antibody HPA008422

 

Antibody HPA023900

 

Antibody CAB022098

 

Glandular cells

Low   Low   Medium  
     
     
     

SMALL INTESTINE - HPA RNA-seq

Average TPM

20.3

overview Male, age 65 Sample 1
TPM: 13.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39 Sample 2
TPM: 14.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68 Sample 3
TPM: 18.1
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85 Sample 4
TPM: 34.7

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

17.9

GTEx sample id

Sample description

RPKM

Small Intestine - Terminal Ileum
RPKM: 17.9
Samples: 88

Max RPKM: 98.5
Min RPKM: 3.7
Std RPKM: 14.4
Median RPKM: 14.4
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 98.5
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 64.9
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 63.0
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 54.0
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 43.5
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 39.2
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 35.0
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 32.5
GTEX-13111-1426-SM-5DUW3 50-59 years, male 31.2
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 30.8
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 27.6
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 27.4
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 27.1
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 24.6
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 23.5
GTEX-117YX-0326-SM-5GICL 50-59 years, male 23.4
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 23.0
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 22.4
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 22.1
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 22.0
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 21.9
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 20.7
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 20.7
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 20.5
GTEX-1192X-2526-SM-59868 50-59 years, male 20.4
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 20.2
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 20.2
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 20.1
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 19.2
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 18.9
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 18.2
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 17.9
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 17.9
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 16.9
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 16.2
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 15.9
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 15.6
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 15.5
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 15.3
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 15.3
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 15.3
GTEX-13O61-1326-SM-5KM31 60-69 years, male 15.0
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 14.6
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 14.5
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 14.4
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 14.3
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 14.1
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 13.9
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 13.6
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 13.5
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 13.2
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 12.7
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 12.7
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 12.6
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 12.1
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 11.9
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 11.5
GTEX-ZTSS-0926-SM-59865 40-49 years, male 11.3
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 11.2
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 11.2
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 10.9
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 10.8
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 10.3
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 10.3
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 9.9
GTEX-ZYWO-1526-SM-5SIAL 40-49 years, female 9.7
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 9.3
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 9.2
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 9.1
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 9.1
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 7.4
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 7.4
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 7.2
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 7.1
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 6.9
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 6.7
GTEX-111YS-1426-SM-5GID8 60-69 years, male 6.4
GTEX-1122O-1326-SM-5H11F 60-69 years, female 6.3
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 6.2
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 6.0
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 6.0
GTEX-13113-1226-SM-5EGHT 60-69 years, female 5.9
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 5.5
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 5.0
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 4.8
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 4.5
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 4.0
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 3.7
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

26.6

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 26.6
FF:10024-101D6 15,40,85 years, mixed 26.6

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