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MAP2
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    TISSUE

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    CELL

  • PATHOLOGY

TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:297.4TPM
GTEx:81.5RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Not detected
Neuronal cells:High
Neuropil:High
 

Antibody staining

Antibody HPA008273

 

Antibody HPA012828

 

Antibody CAB001984

 

Endothelial cells

Not detected   Not detected   Not detected  

Glial cells

Not detected   Not detected   Not detected  

Neuronal cells

High   High   High  

Neuropil

High   High   High  
     
     
     

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

297.4

N/A Male, age 5 Sample 1
TPM: 342.9
overview Female, age 40 Sample 2
TPM: 276
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70 Sample 3
TPM: 273.3
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

81.5

GTEx sample id

Sample description

RPKM

Brain - Cortex
RPKM: 76.7
Samples: 114

Max RPKM: 181.0
Min RPKM: 14.5
Std RPKM: 30.0
Median RPKM: 78.1
GTEX-PVOW-2526-SM-2XCF7 40-49 years, male 181.0
GTEX-11NV4-2126-SM-5N9DS 60-69 years, male 168.2
GTEX-T2IS-3026-SM-32QPM 20-29 years, female 138.4
GTEX-11ZUS-2926-SM-5FQSL 30-39 years, male 133.2
GTEX-Z93S-2926-SM-57WB9 50-59 years, male 133.1
GTEX-WL46-2926-SM-3LK82 50-59 years, male 124.9
GTEX-13X6J-3026-SM-5Q5CU 50-59 years, male 121.1
GTEX-WHSE-3026-SM-3P5ZH 20-29 years, male 117.2
GTEX-QMR6-1426-SM-32PLA 50-59 years, male 116.7
GTEX-145MH-3026-SM-5Q5DZ 50-59 years, male 116.6
GTEX-ZUA1-3026-SM-59HJC 40-49 years, male 115.6
GTEX-13O3Q-2926-SM-5KM45 50-59 years, male 114.5
GTEX-11PRG-2926-SM-5987A 50-59 years, male 109.3
GTEX-13X6K-2926-SM-5Q5D5 60-69 years, female 107.4
GTEX-Y111-2726-SM-4TT3N 50-59 years, male 106.6
GTEX-WZTO-2926-SM-3NM9I 40-49 years, male 106.2
GTEX-WVLH-3026-SM-3MJG9 50-59 years, male 104.4
GTEX-131YS-3126-SM-5KLYT 60-69 years, female 103.3
GTEX-1313W-3126-SM-5LZUI 50-59 years, female 100.8
GTEX-14ASI-3026-SM-5S2PN 60-69 years, male 100.8
GTEX-QVJO-1426-SM-2S1QY 60-69 years, female 99.8
GTEX-RNOR-2326-SM-2TF4I 50-59 years, female 99.8
GTEX-TSE9-3026-SM-3DB76 60-69 years, female 99.5
GTEX-13VXU-2926-SM-5LU5C 50-59 years, male 99.3
GTEX-Y8DK-0826-SM-4TT3T 60-69 years, male 98.3
GTEX-12ZZX-2926-SM-5GCOQ 40-49 years, female 97.5
GTEX-12126-1026-SM-5P9JJ 20-29 years, male 97.4
GTEX-UTHO-3026-SM-3GAFB 60-69 years, male 97.1
GTEX-YFC4-3126-SM-5PNV6 40-49 years, female 97.0
GTEX-X4XX-3026-SM-3NMB2 60-69 years, male 96.7
GTEX-QDT8-2926-SM-32PKC 30-39 years, female 95.7
GTEX-WWYW-3126-SM-3NB39 50-59 years, female 95.6
GTEX-T5JC-2426-SM-3NMDB 20-29 years, male 94.1
GTEX-13NYC-2826-SM-5K7WR 60-69 years, male 91.7
GTEX-13FLW-1426-SM-5K7YE 50-59 years, male 89.8
GTEX-ZYFD-3026-SM-5E44C 50-59 years, male 89.3
GTEX-12WSC-3026-SM-5GCNF 50-59 years, male 89.2
GTEX-13OVH-3026-SM-5MR4N 70-79 years, male 88.9
GTEX-144GL-3026-SM-5Q5CW 50-59 years, male 88.5
GTEX-13JUV-2926-SM-5LZX7 40-49 years, female 87.9
GTEX-T6MN-2626-SM-32PMQ 50-59 years, male 87.9
GTEX-13OW6-3026-SM-5J2MI 50-59 years, male 87.0
GTEX-11DXY-3226-SM-5GIDE 60-69 years, male 86.8
GTEX-14BMV-3026-SM-5S2PQ 50-59 years, male 85.8
GTEX-ZAK1-3026-SM-5S2MJ 50-59 years, female 85.6
GTEX-111FC-3126-SM-5GZZ2 60-69 years, male 85.0
GTEX-14A5I-2926-SM-5Q5CQ 50-59 years, female 83.7
GTEX-13SLX-3126-SM-5S2Q5 50-59 years, female 82.2
GTEX-1128S-2726-SM-5H12C 60-69 years, female 82.0
GTEX-11NUK-2926-SM-5A5MD 50-59 years, male 81.6
GTEX-13FHP-3026-SM-5IJBS 50-59 years, male 81.0
GTEX-13FHO-3026-SM-5J1O9 60-69 years, male 80.6
GTEX-145LS-3126-SM-5Q5BY 60-69 years, female 79.4
GTEX-R55F-1326-SM-5S2V4 50-59 years, male 79.3
GTEX-13FXS-3126-SM-5J2NN 50-59 years, male 79.0
GTEX-XOTO-3026-SM-4B65M 50-59 years, male 78.7
GTEX-YJ89-3026-SM-5IFJI 60-69 years, male 78.6
GTEX-NPJ8-1526-SM-2D7VU 40-49 years, male 77.6
GTEX-12ZZZ-3026-SM-5BC67 60-69 years, male 76.0
GTEX-NPJ7-2726-SM-2I3FT 60-69 years, female 75.2
GTEX-XLM4-3026-SM-4AT6L 60-69 years, male 73.4
GTEX-11DXW-1126-SM-5H12Q 40-49 years, male 72.3
GTEX-13O3O-3126-SM-5KM3H 60-69 years, female 71.8
GTEX-145MF-2726-SM-5O995 50-59 years, male 71.0
GTEX-147GR-3026-SM-5S2ML 60-69 years, male 71.0
GTEX-117XS-3026-SM-5N9CA 60-69 years, male 70.9
GTEX-145MG-3026-SM-5RQJA 50-59 years, male 70.1
GTEX-11EI6-3026-SM-5GZZO 60-69 years, male 70.0
GTEX-12WSH-3026-SM-5CVNI 50-59 years, male 69.6
GTEX-X585-3026-SM-46MWF 50-59 years, male 69.4
GTEX-Q2AG-2926-SM-2HMJ3 40-49 years, female 69.1
GTEX-13PL6-3126-SM-5LUAR 40-49 years, female 68.2
GTEX-ZE7O-3126-SM-5HL5X 50-59 years, female 67.7
GTEX-13NYS-3126-SM-5KLYV 60-69 years, male 67.3
GTEX-11GSO-2926-SM-5HL73 60-69 years, male 65.7
GTEX-OXRN-2426-SM-2I5EQ 50-59 years, male 64.4
GTEX-12ZZY-3026-SM-5GCOU 60-69 years, male 64.3
GTEX-13NYB-3026-SM-5IJD7 40-49 years, male 64.2
GTEX-132Q8-3026-SM-5PNVG 60-69 years, male 63.5
GTEX-12ZZW-2926-SM-5LZUP 50-59 years, male 62.0
GTEX-ZVT3-3026-SM-5E43N 60-69 years, female 61.6
GTEX-1399T-3026-SM-5KLZC 60-69 years, male 59.9
GTEX-RU72-3026-SM-5SI7Y 50-59 years, female 59.3
GTEX-11OC5-0726-SM-5P9JK 60-69 years, male 58.4
GTEX-131XW-3126-SM-5LZUC 50-59 years, female 58.2
GTEX-1192X-3126-SM-5N9BY 50-59 years, male 57.8
GTEX-11EMC-3226-SM-5EGKW 60-69 years, female 55.7
GTEX-11WQK-3026-SM-5EQL6 50-59 years, male 54.7
GTEX-ZAJG-3126-SM-5HL9J 50-59 years, female 54.3
GTEX-QVUS-2826-SM-3GADB 60-69 years, female 52.8
GTEX-13QIC-2926-SM-5J2NF 60-69 years, female 50.0
GTEX-12WSD-3126-SM-5HL7P 60-69 years, female 47.9
GTEX-ZZPT-3026-SM-5GZXH 50-59 years, male 46.2
GTEX-11ONC-2926-SM-5P9JM 60-69 years, male 45.3
GTEX-13S7M-3126-SM-5RQJQ 60-69 years, female 43.5
GTEX-1117F-3226-SM-5N9CT 60-69 years, female 43.4
GTEX-13OW8-2826-SM-5L3GC 60-69 years, male 42.3
GTEX-139T8-1026-SM-5J2MC 60-69 years, male 41.8
GTEX-11GS4-3126-SM-5A5LH 60-69 years, male 40.5
GTEX-N7MT-1126-SM-5SI7V 60-69 years, female 39.3
GTEX-13G51-3026-SM-5IJB8 60-69 years, male 37.0
GTEX-11O72-2926-SM-5BC4V 40-49 years, male 36.1
GTEX-13PVQ-3026-SM-5SI93 50-59 years, male 35.3
GTEX-13JVG-3126-SM-5L3FH 60-69 years, male 35.1
GTEX-13OW7-3026-SM-5L3GY 50-59 years, male 33.0
GTEX-144FL-3026-SM-5O99C 50-59 years, male 32.9
GTEX-11OF3-2926-SM-5HL78 60-69 years, male 32.0
GTEX-13IVO-2926-SM-5L3CZ 70-79 years, male 31.6
GTEX-PWO3-0926-SM-2I5EY 60-69 years, female 28.9
GTEX-13OVJ-2826-SM-5L3GW 50-59 years, female 28.3
GTEX-11TTK-2926-SM-5PNYP 60-69 years, female 26.5
GTEX-12WSA-2926-SM-5EQ4D 60-69 years, male 25.7
GTEX-11GSP-3226-SM-5986O 60-69 years, female 24.0
GTEX-1445S-3026-SM-5O9BR 60-69 years, male 14.5
Show all
Brain - Frontal Cortex (BA9)
RPKM: 86.6
Samples: 108

Max RPKM: 205.9
Min RPKM: 13.1
Std RPKM: 37.8
Median RPKM: 84.1
GTEX-Z93S-0011-R10a-SM-4RGNM 50-59 years, male 205.9
GTEX-YJ89-0011-R10a-SM-4SOK9 60-69 years, male 153.7
GTEX-12WSE-0011-R10b-SM-5P9JV 20-29 years, male 153.6
GTEX-131XH-0011-R10a-SM-5EGLJ 50-59 years, male 151.8
GTEX-WL46-0011-R10A-SM-3MJFQ 50-59 years, male 151.1
GTEX-QVJO-0011-R10A-SM-2S1QJ 60-69 years, female 149.4
GTEX-WVLH-0011-R10A-SM-3MJFM 50-59 years, male 146.2
GTEX-12126-0011-R10b-SM-5BC6T 20-29 years, male 145.7
GTEX-145MH-0011-R10b-SM-5PNUK 50-59 years, male 145.2
GTEX-13X6J-0011-R10b-SM-5PNWA 50-59 years, male 133.9
GTEX-12WSC-0011-R10a-SM-5GU57 50-59 years, male 131.7
GTEX-Q2AG-0011-R10A-SM-2HMLA 40-49 years, female 129.6
GTEX-YFC4-0011-R10a-SM-4SOK5 40-49 years, female 128.0
GTEX-S7SE-0011-R10A-SM-2XCDF 50-59 years, male 127.7
GTEX-T6MN-0011-R10A-SM-32QP7 50-59 years, male 126.8
GTEX-13FXS-0011-R10a-SM-5J2MA 50-59 years, male 126.0
GTEX-131YS-0011-R10b-SM-5EQ5N 60-69 years, female 124.9
GTEX-13G51-0011-R10b-SM-5LZYF 60-69 years, male 124.8
GTEX-QMR6-0011-R10A-SM-32PKO 50-59 years, male 123.9
GTEX-WZTO-0011-R10B-SM-4E3KB 40-49 years, male 121.7
GTEX-12WSM-0011-R10a-SM-5DUWV 60-69 years, male 120.3
GTEX-QDT8-0011-R10A-SM-32PKG 30-39 years, female 120.3
GTEX-12ZZZ-0011-R10a-SM-5P9HC 60-69 years, male 119.8
GTEX-N7MS-0011-R10A-SM-2HMJK 60-69 years, male 119.1
GTEX-1313W-0011-R10b-SM-5DUXA 50-59 years, female 116.7
GTEX-TSE9-0011-R10A-SM-3DB7O 60-69 years, female 115.0
GTEX-ZVZQ-0011-R10b-SM-51MRT 60-69 years, female 114.3
GTEX-NL3H-0011-R10A-SM-2I3E9 60-69 years, male 113.3
GTEX-P44H-0011-R10A-SM-2XCEK 40-49 years, male 112.8
GTEX-13OVL-0011-R10a-SM-5L3GS 50-59 years, male 112.3
GTEX-11ZUS-0011-R10b-SM-5BC79 30-39 years, male 111.1
GTEX-T5JC-0011-R10A-SM-32PM2 20-29 years, male 110.8
GTEX-Y8DK-0011-R10A-SM-4SOK1 60-69 years, male 110.5
GTEX-13JUV-0011-R10b-SM-5LZXR 40-49 years, female 110.1
GTEX-13O3Q-0011-R10b-SM-5KM39 50-59 years, male 108.2
GTEX-X4XX-0011-R10B-SM-46MWO 60-69 years, male 107.9
GTEX-X585-0011-R10A-SM-46MUY 50-59 years, male 106.9
GTEX-12ZZX-0011-R10b-SM-5DUWK 40-49 years, female 106.0
GTEX-WWYW-0011-R10A-SM-3NB35 50-59 years, female 104.1
GTEX-14BIN-0011-R10a-SM-5S2UA 50-59 years, female 99.6
GTEX-145LS-0011-R10a-SM-5PNUQ 60-69 years, female 98.5
GTEX-12ZZY-0011-R10b-SM-5HL7W 60-69 years, male 96.7
GTEX-13OW6-0011-R10a-SM-5L3HE 50-59 years, male 96.7
GTEX-147GR-0011-R10b-SM-5S2UM 60-69 years, male 95.8
GTEX-139TS-0011-R10a-SM-5K7TU 60-69 years, male 95.4
GTEX-ZAB4-0011-R10a-SM-4SOKH 40-49 years, male 95.0
GTEX-13OW8-0011-R10a-SM-5L3H6 60-69 years, male 94.9
GTEX-145MG-0011-R10a-SM-5PNWG 50-59 years, male 94.6
GTEX-ZF28-0011-R10a-SM-4WWEH 60-69 years, male 91.9
GTEX-13X6I-0011-R10a-SM-5PNWI 60-69 years, male 90.3
GTEX-13FLW-0011-R10b-SM-5LZZF 50-59 years, male 89.5
GTEX-11H98-0011-R10b-SM-5NQ98 50-59 years, male 86.3
GTEX-ZXG5-0011-R10a-SM-57WDD 60-69 years, male 86.1
GTEX-13QIC-0011-R10a-SM-5O9C7 60-69 years, female 84.4
GTEX-132Q8-0011-R10b-SM-5DUWZ 60-69 years, male 83.7
GTEX-13FHO-0011-R10b-SM-5J2MM 60-69 years, male 83.5
GTEX-13S7M-0011-R10b-SM-5PNZB 60-69 years, female 83.1
GTEX-12WSH-0011-R10a-SM-5LZUS 50-59 years, male 81.7
GTEX-ZUA1-0011-R10a-SM-51MT6 40-49 years, male 80.6
GTEX-14ASI-0011-R10b-SM-5S2VZ 60-69 years, male 79.6
GTEX-13SLX-0011-R10a-SM-5P9HV 50-59 years, female 78.4
GTEX-NPJ7-0011-R10A-SM-2I3E5 60-69 years, female 77.6
GTEX-12WSF-0011-R10a-SM-5LZVH 70-79 years, male 77.4
GTEX-ZVT3-0011-R10b-SM-57WB6 60-69 years, female 77.3
GTEX-13RTJ-0011-R10b-SM-5O9CW 60-69 years, male 77.1
GTEX-13X6K-0011-R10a-SM-5P9JR 60-69 years, female 76.8
GTEX-13N1W-0011-R10b-SM-5MR4H 70-79 years, male 75.6
GTEX-ZDXO-0011-R10a-SM-4WWD8 60-69 years, male 74.9
GTEX-11WQK-0011-R10a-SM-5BC6R 50-59 years, male 74.8
GTEX-X4EP-0011-R10B-SM-4QASJ 60-69 years, female 72.7
GTEX-NPJ8-0011-R10A-SM-2YUMO 40-49 years, male 72.5
GTEX-OXRN-0011-R10A-SM-2I5GC 50-59 years, male 72.2
GTEX-13O3O-0011-R10a-SM-5LUA9 60-69 years, female 72.1
GTEX-NL4W-0011-R10A-SM-2I3DY 50-59 years, male 71.1
GTEX-QVUS-0011-R10A-SM-3GIK3 60-69 years, female 70.7
GTEX-13OW7-0011-R10a-SM-5L3H3 50-59 years, male 69.8
GTEX-N7MT-0011-R10A-SM-2I3E1 60-69 years, female 68.1
GTEX-13FLV-0011-R10b-SM-5LZZ2 50-59 years, male 67.8
GTEX-XLM4-0011-R10A-SM-4AT5P 60-69 years, male 67.4
GTEX-147F4-0011-R10b-SM-5S2WC 50-59 years, male 63.8
GTEX-13CZV-0011-R10b-SM-5LZYD 60-69 years, male 63.6
GTEX-13NYB-0011-R10a-SM-5KM43 40-49 years, male 59.8
GTEX-14BIL-0011-R10a-SM-5SI75 50-59 years, male 59.2
GTEX-13QJC-0011-R10a-SM-5SI63 60-69 years, female 58.4
GTEX-12ZZW-0011-R10b-SM-5HL9X 50-59 years, male 56.5
GTEX-13NYS-0011-R10a-SM-5MR4S 60-69 years, male 52.8
GTEX-11WQC-0011-R10a-SM-57WCT 60-69 years, male 52.2
GTEX-13SLW-0011-R10a-SM-5S2UI 70-79 years, male 51.2
GTEX-13FTZ-0011-R10b-SM-5KLZS 60-69 years, male 45.8
GTEX-145LU-0011-R10a-SM-5PNWJ 50-59 years, male 44.4
GTEX-OXRO-0011-R10A-SM-2I5EH 60-69 years, female 42.8
GTEX-13NZA-0011-R10b-SM-5KM54 60-69 years, male 41.1
GTEX-12WSD-0011-R10b-SM-5GU79 60-69 years, female 38.2
GTEX-X261-0011-R10B-SM-4E3JT 50-59 years, male 37.0
GTEX-RVPU-0011-R10A-SM-2XCAH 50-59 years, male 36.4
GTEX-13N2G-0011-R10a-SM-5MR34 60-69 years, male 34.7
GTEX-1477Z-0011-R10b-SM-5S2RF 60-69 years, male 31.7
GTEX-14753-0011-R10b-SM-5S2WE 60-69 years, male 31.6
GTEX-ZE7O-0011-R10a-SM-57WAZ 50-59 years, female 29.8
GTEX-11GSP-0011-R10a-SM-5NQ7J 60-69 years, female 29.4
GTEX-13OVJ-0011-R10b-SM-5L3HT 50-59 years, female 29.3
GTEX-13JVG-0011-R10b-SM-5KM2P 60-69 years, male 27.3
GTEX-13IVO-0011-R10a-SM-5LZY3 70-79 years, male 27.1
GTEX-XMD1-0011-R10A-SM-4AT4A 60-69 years, male 22.8
GTEX-12WSA-0011-R10b-SM-5P9ET 60-69 years, male 21.5
GTEX-ZV68-0011-R10a-SM-51MT7 50-59 years, female 14.9
GTEX-1445S-0011-R10a-SM-5PNWB 60-69 years, male 13.4
GTEX-131XW-0011-R10a-SM-5DUVA 50-59 years, female 13.1
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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