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CDH17

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:261.7TPM
GTEx:58.8RPKM
FANTOM5:429.5Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:High
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA023614

  

Antibody HPA023616

  

Antibody HPA026556

  

Antibody CAB025143

  

Endothelial cells

 Not detected   Not detected   Not detected   Not detected  

Glandular cells

 High   High   High   High  

Peripheral nerve/ganglion

 Low   Not detected   Not detected   Not detected  
       
       
       

COLON - HPA RNA-seq

Average TPM

261.7
overview Male, age 54 Sample 1
TPM: 182.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 236.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 259.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 323.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 113.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 164.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 355.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 311.4
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 175.4
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 367.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 428.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 254.3
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 229.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

58.8

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 1.4
Samples: 149

Max RPKM: 31.5
Min RPKM: 0.0
Std RPKM: 4.0
Median RPKM: 0.3
GTEX-XBED-1726-SM-47JYO 60-69 years, male 31.5
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 22.3
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 19.3
GTEX-V955-1726-SM-4JBHF 60-69 years, male 15.3
GTEX-11ONC-1926-SM-5GU75 60-69 years, male 11.8
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 8.9
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 8.7
GTEX-11EQ9-1526-SM-5PNY7 30-39 years, male 8.3
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 8.0
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 7.8
Show all
Colon - Transverse
RPKM: 102.4
Samples: 196

Max RPKM: 267.9
Min RPKM: 0.0
Std RPKM: 79.5
Median RPKM: 119.4
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 267.9
GTEX-111CU-1426-SM-5GZYP 50-59 years, male 260.0
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 243.4
GTEX-144GM-1226-SM-5LU52 20-29 years, male 240.7
GTEX-1122O-1526-SM-5N9CL 60-69 years, female 231.1
GTEX-11P82-1026-SM-5BC5J 20-29 years, male 229.3
GTEX-R55G-1226-SM-48FDC 40-49 years, female 226.3
GTEX-U3ZN-2126-SM-4DXU1 30-39 years, female 222.1
GTEX-ZVT2-1926-SM-5GU5T 50-59 years, female 221.5
GTEX-14DAR-1526-SM-5RQIX 50-59 years, male 219.8
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

429.5

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 429.5
FF:10014-101C5 62,83,84 years, mixed 429.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.