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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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PATHOLOGY ATLAS MELANOMA

GENE/PROTEIN

Antibody validation

Dictionary

Melanoma

MELANOMA - Survival analysis

Best separation

Median separation

Expression cutoff

133.2 FPKM 74.6 FPKM

3-year survival high

0% 54%

3-year survival low

44% 16%

Log-rank P value

6.07e-2 5.91e-1

Interactive survival scatter plot (individual patient data)




Stage:



TCGA RNA samples

Average FPKM

155.5

Number of samples

102

Samples

Sample

Description

FPKM

TCGA-BF-AAP6-01A 55 years, male, white, stage:iii 1359.4
TCGA-HR-A5NC-01A 90 years, female 1311.9
TCGA-EB-A6R0-01A 58 years, female, white, stage:iic 734.0
TCGA-EB-A24C-01A 56 years, male, white 720.5
TCGA-EB-A3XF-01A 57 years, male, white, stage:iic 704.6
TCGA-EB-A44P-01A 58 years, female, white, stage:iic 599.8
TCGA-EB-A550-01A 75 years, female, white, stage:iic 593.9
TCGA-D9-A3Z4-01A 54 years, male, white, stage:iiic 531.4
TCGA-FS-A1ZN-01A 43 years, male, white, stage:iiia 530.7
TCGA-ER-A42H-01A 77 years, male, white 419.4
TCGA-EB-A82C-01A 70 years, female, asian, stage:iic 397.9
TCGA-EB-A4P0-01A 82 years, male, white, stage:iic 369.5
TCGA-GF-A2C7-01A 48 years, male, white, stage:iic 350.4
TCGA-D9-A4Z2-01A 50 years, male, white, stage:iiic 344.1
TCGA-EB-A24D-01A 72 years, male, white, stage:iiib 342.4
TCGA-BF-A1PU-01A 46 years, female, white, stage:iic 329.5
TCGA-BF-A3DM-01A 63 years, male, white, stage:iia 280.4
TCGA-EB-A4IQ-01A 42 years, female, asian, stage:iiib 277.8
TCGA-BF-A1PZ-01A 71 years, female, white, stage:iib 270.9
TCGA-FR-A3R1-01A 69 years, male, white, stage:iic 250.4
TCGA-EB-A431-01A 34 years, male, white, stage:iic 243.5
TCGA-BF-AAP7-01A 76 years, female, white, stage:iic 241.6
TCGA-WE-A8K4-01A 85 years, male, white, stage:iib 218.9
TCGA-BF-AAP2-01A 62 years, male, white, stage:iib 192.0
TCGA-BF-A5EQ-01A 63 years, male, white, stage:iic 170.3
TCGA-EB-A85J-01A 66 years, female, white, stage:iib 166.2
TCGA-BF-AAP1-01A 86 years, male, white, stage:iic 146.4
TCGA-EB-A6QZ-01A 76 years, female, white, stage:iia 145.6
TCGA-D3-A5GT-01A 43 years, male, white, stage:iiic 143.9
TCGA-ER-A19K-01A 79 years, female, white, stage:iic 143.5
TCGA-ER-A19T-01A 51 years, male, white, stage:iv 142.7
TCGA-BF-A3DN-01A 81 years, female, white, stage:iiic 142.6
TCGA-EB-A5SE-01A 73 years, male, white, stage:iib 139.5
TCGA-FW-A5DX-01A 71 years, male, white, stage:iiic 127.0
TCGA-EB-A4XL-01A 56 years, female, white, stage:iic 122.5
TCGA-EB-A4IS-01A 77 years, male, white, stage:iib 122.3
TCGA-GN-A8LN-01A 68 years, male, white, stage:iic 115.0
TCGA-BF-AAOU-01A 73 years, female, white, stage:iic 114.2
TCGA-GN-A4U5-01A 61 years, female, white, stage:ib 105.0
TCGA-XV-A9W2-01A 81 years, male, white, stage:i 104.3
TCGA-EB-A97M-01A 66 years, male, white, stage:iic 98.9
TCGA-EB-A41B-01A 76 years, female, white, stage:iic 98.6
TCGA-EB-A6QY-01A 71 years, male, white, stage:iic 97.1
TCGA-EB-A44O-01A 69 years, male, white, stage:iib 92.9
TCGA-BF-A1PX-01A 56 years, male, white, stage:iiib 91.8
TCGA-EB-A41A-01A 90 years, male, white, stage:iic 87.9
TCGA-EB-A57M-01A 56 years, male, asian, stage:iiib 86.0
TCGA-EB-A3XD-01A 53 years, female, white, stage:iic 84.9
TCGA-YG-AA3N-01A 67 years, male, stage:iic 83.9
TCGA-EB-A3XE-01A 77 years, female, white, stage:iia 83.9
TCGA-BF-AAP4-01A 61 years, male, white, stage:iic 81.8
TCGA-EB-A5FP-01A 65 years, female, white, stage:iv 67.4
TCGA-EB-A3XB-01A 63 years, male, white, stage:ii 60.9
TCGA-EB-A82B-01A 58 years, female, asian, stage:iii 59.1
TCGA-EB-A51B-01A 53 years, male, white, stage:iic 57.4
TCGA-BF-AAOX-01A 83 years, male, white, stage:iic 53.3
TCGA-EB-A299-01A 63 years, male, white, stage:iia 48.5
TCGA-ER-A194-01A 77 years, male, white 46.4
TCGA-GF-A769-01A 39 years, male, white, stage:iic 45.6
TCGA-BF-A9VF-01A 77 years, male, white, stage:iic 42.7
TCGA-EB-A44N-01A 59 years, male, white, stage:iic 42.3
TCGA-BF-A5ER-01A 63 years, male, white, stage:iic 40.7
TCGA-D9-A4Z5-01A 68 years, male, white, stage:iib 39.3
TCGA-EB-A5UM-01A 48 years, female, white, stage:iic 39.1
TCGA-BF-A5EP-01A 75 years, female, white, stage:iiic 38.7
TCGA-EB-A3Y6-01A 56 years, female, white, stage:iic 38.6
TCGA-EB-A551-01A 78 years, female, white, stage:iiic 36.2
TCGA-EB-A3XC-01A 74 years, male, white, stage:iic 28.2
TCGA-FR-A2OS-01A 49 years, female, white, stage:iic 26.1
TCGA-EB-A4OY-01A 65 years, female, white, stage:iiib 25.7
TCGA-DA-A960-01A 73 years, male, white, stage:iib 22.1
TCGA-XV-AAZY-01A 76 years, female, white, stage:iiic 21.6
TCGA-EB-A3HV-01A 37 years, male, white, stage:iic 21.3
TCGA-BF-A1PV-01A 74 years, female, white, stage:iic 20.5
TCGA-EB-A4OZ-01A 42 years, female, white, stage:iiic 18.4
TCGA-EB-A3Y7-01A 86 years, female, white, stage:iiib 17.1
TCGA-XV-A9W5-01A 51 years, male, white, stage:i/ii nos 15.8
TCGA-EB-A85I-01A 66 years, male, white, stage:iic 15.6
TCGA-BF-A5EO-01A 65 years, male, white, stage:iic 14.8
TCGA-BF-A5ES-01A 76 years, female, white, stage:iic 12.9
TCGA-IH-A3EA-01A 61 years, male, white, stage:iic 9.2
TCGA-FR-A726-01A 90 years, male, white, stage:iic 8.5
TCGA-ER-A2NB-01A 57 years, male, white, stage:iiib 8.1
TCGA-BF-A3DL-01A 84 years, female, white, stage:iiib 7.6
TCGA-XV-A9VZ-01A 90 years, female, white, stage:ii 7.2
TCGA-XV-AAZV-01A 56 years, female, white, stage:ii 7.1
TCGA-EB-A5VU-01A 56 years, male, asian, stage:iiib 6.5
TCGA-BF-A3DJ-01A 36 years, female, white, stage:iiib 6.3
TCGA-ER-A196-01A 64 years, female, white, stage:iic 6.0
TCGA-FR-A728-01A 54 years, female, white, stage:iiib 5.8
TCGA-D9-A4Z3-01A 73 years, female, white, stage:iiic 4.4
TCGA-XV-AAZW-01A 62 years, female, white, stage:ii 3.5
TCGA-ER-A2NF-01A 53 years, male, white, stage:iiib 2.8
TCGA-BF-A1Q0-01A 80 years, male, white, stage:iic 2.5
TCGA-GN-A263-01A 24 years, male, white, stage:iv 2.4
TCGA-EB-A42Z-01A 49 years, male, asian, stage:iiic 2.3
TCGA-EB-A1NK-01A 48 years, male, white, stage:iic 2.1
TCGA-EB-A42Y-01A 73 years, female, asian, stage:iic 1.5
TCGA-EB-A553-01A 62 years, male, white, stage:iic 0.5
TCGA-EB-A5SF-01A 78 years, female, white, stage:iic 0.4
TCGA-BF-AAP8-01A 58 years, male, white, stage:iic 0.3
TCGA-GN-A26C-01A 77 years, male, white, stage:iiic 0.0
Show all

MELANOMA - Protein expression

 

Antibody HPA010743

Antibody HPA010800

Antibody CAB017634

 Antibody staining
  High
  Medium
  Low
  Not detected
    
 Intensity
  Strong
  Moderate
  Weak
  Negative
    
 Quantity
  >75%
  75%-25%
  <25%
  Rare
  Negative
    
 Location
  Cytoplasmic/membranous,nuclear
  Cytoplasmic/membranous
  Nuclear
  None
    

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