We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • HUMAN PATHOLOGY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
APOB
  • premium

    TISSUE

  • premium

    CELL

  • PATHOLOGY

TISSUE ATLAS PRIMARY DATA LIVER

GENE/PROTEIN

Antibody validation


Dictionary

Liver

Tissue proteome

Liver

LIVER - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:619.0TPM
GTEx:229.8RPKM
FANTOM5:4458.1Tags Per Million

LIVER - Annotated protein expression

Annotated protein
expression

Bile duct cells:Not detected
Hepatocytes:Not detected
 

Antibody staining

Antibody HPA049793

 

Antibody CAB016070

 

Bile duct cells

Not detected   Not detected  

Hepatocytes

Not detected   Not detected  
   
   
   

LIVER - HPA RNA-seq

Average TPM

619.0

N/A Female, age 60 Sample 1
TPM: 578.9
overview Male, age 54 Sample 2
TPM: 765.6
Cell types%
Hepatocytes: 80
Fibroblasts: 15
Other cell types: 5
overview Male, age 74 Sample 3
TPM: 709.5
Cell types%
Hepatocytes: 85
Fibroblasts: 5
Other cell types: 10
overview Female, age 62 Sample 4
TPM: 725.1
Cell types%
Hepatocytes: 70
Fibroblasts: 10
Other cell types: 20
overview Male, age 78 Sample 5
TPM: 468.1
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Male, age 53 Sample 6
TPM: 599.5
Cell types%
Hepatocytes: 80
Fibroblasts: 5
Other cell types: 15
overview Male, age 77 Sample 7
TPM: 493.3
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Female, age 72 Sample 8
TPM: 341.5
Cell types%
Hepatocytes: 50
Fibroblasts: 10
Other cell types: 40
overview Male, age 70 Sample 9
TPM: 579.2
Cell types%
Hepatocytes: 65
Fibroblasts: 10
Other cell types: 25
overview Female, age 23 Sample 10
TPM: 929.6
Cell types%
Hepatocytes: 70
Fibroblasts: 5
Other cell types: 25

LIVER - GTEx RNA-seq

Average RPKM

229.8

GTEx sample id

Sample description

RPKM

Liver
RPKM: 229.8
Samples: 119

Max RPKM: 589.0
Min RPKM: 81.7
Std RPKM: 84.8
Median RPKM: 206.5
GTEX-ZPU1-0826-SM-57WG2 40-49 years, male 589.0
GTEX-Z9EW-0426-SM-5CVM9 40-49 years, male 506.3
GTEX-R53T-0326-SM-48FEC 50-59 years, female 440.9
GTEX-ZF2S-3026-SM-4WWCH 50-59 years, female 423.3
GTEX-U3ZN-0226-SM-3DB8D 30-39 years, female 411.4
GTEX-RM2N-1926-SM-48FCU 50-59 years, male 407.0
GTEX-OOBJ-0826-SM-3NB2K 60-69 years, male 367.9
GTEX-S4Z8-0526-SM-4AD4T 60-69 years, male 367.2
GTEX-Y5LM-0426-SM-4VBRO 40-49 years, female 365.8
GTEX-1399R-1226-SM-5P9GF 30-39 years, male 362.8
GTEX-ZAB5-0426-SM-5CVMI 50-59 years, male 359.4
GTEX-X3Y1-2726-SM-4PQZH 40-49 years, male 356.6
GTEX-TKQ2-1726-SM-4DXUP 50-59 years, male 355.6
GTEX-ZZPU-0426-SM-5GZYH 50-59 years, female 350.2
GTEX-13PVR-0126-SM-5S2PY 60-69 years, female 347.6
GTEX-14E1K-0326-SM-5S2PE 50-59 years, male 345.2
GTEX-WFON-1726-SM-4LVMQ 40-49 years, male 337.8
GTEX-ZF29-2026-SM-4WWB7 60-69 years, female 329.9
GTEX-11DXZ-0126-SM-5EGGY 50-59 years, male 321.1
GTEX-11EQ9-0526-SM-5A5JZ 30-39 years, male 320.9
GTEX-QV44-0326-SM-4R1KD 50-59 years, male 320.9
GTEX-14AS3-0126-SM-5Q5F4 40-49 years, female 309.1
GTEX-Q734-0326-SM-48U15 40-49 years, female 298.0
GTEX-QDVN-0826-SM-48TZ2 50-59 years, male 282.2
GTEX-145MF-0826-SM-5QGQA 50-59 years, male 273.5
GTEX-1399T-0826-SM-5IFES 60-69 years, male 270.4
GTEX-13FTW-1126-SM-5J2NV 40-49 years, male 266.5
GTEX-VUSG-0126-SM-4KL1X 50-59 years, male 265.9
GTEX-UPK5-1426-SM-4JBHH 40-49 years, male 265.4
GTEX-132NY-0926-SM-5P9G3 60-69 years, male 263.6
GTEX-RU72-1426-SM-46MUF 50-59 years, female 259.5
GTEX-PX3G-0826-SM-48TZS 20-29 years, female 257.1
GTEX-146FH-1526-SM-5NQBU 50-59 years, female 256.2
GTEX-YB5E-0326-SM-5IFHU 40-49 years, male 254.0
GTEX-Y5V5-0926-SM-4VBPZ 60-69 years, female 251.7
GTEX-WYVS-1926-SM-4PQZ2 40-49 years, female 249.3
GTEX-ZVP2-0626-SM-51MSO 50-59 years, male 249.1
GTEX-147JS-1126-SM-5RQIW 60-69 years, male 248.0
GTEX-11OF3-0726-SM-5BC4Z 60-69 years, male 247.9
GTEX-UPIC-0926-SM-4IHLV 20-29 years, female 245.8
GTEX-QEL4-1226-SM-447A4 50-59 years, male 245.1
GTEX-12WSL-0226-SM-5CVMJ 50-59 years, male 244.4
GTEX-12WSD-1426-SM-5GCN9 60-69 years, female 240.2
GTEX-13N11-0926-SM-5IJG2 50-59 years, female 237.3
GTEX-13VXU-0926-SM-5IFFH 50-59 years, male 235.1
GTEX-139TU-0826-SM-5IJFG 60-69 years, male 234.8
GTEX-12KS4-1326-SM-5LUB3 30-39 years, male 231.4
GTEX-RTLS-1326-SM-46MUN 60-69 years, female 231.0
GTEX-S32W-1926-SM-4AD63 50-59 years, female 222.8
GTEX-13OW6-2626-SM-5IFF2 50-59 years, male 219.1
GTEX-11WQC-0726-SM-5EQMR 60-69 years, male 219.0
GTEX-ZAB4-0826-SM-5LU9D 40-49 years, male 219.0
GTEX-145MO-2326-SM-5NQ9K 60-69 years, male 216.0
GTEX-12WSG-0626-SM-5FQTQ 50-59 years, female 215.5
GTEX-14DAQ-1726-SM-5S2R2 60-69 years, female 214.3
GTEX-11ZTS-1426-SM-5EQMM 60-69 years, female 212.8
GTEX-144GM-1326-SM-5LU5E 20-29 years, male 212.6
GTEX-XOTO-0826-SM-4B65O 50-59 years, male 208.6
GTEX-13SLX-1226-SM-5S2Q6 50-59 years, female 207.9
GTEX-WQUQ-1926-SM-4OOSA 60-69 years, male 206.5
GTEX-13N2G-0926-SM-5IFGJ 60-69 years, male 205.1
GTEX-P78B-1326-SM-3P611 40-49 years, female 201.4
GTEX-13FLV-0326-SM-5N9DJ 50-59 years, male 200.9
GTEX-QESD-2026-SM-447BI 20-29 years, male 197.7
GTEX-X4EP-1026-SM-4QAS5 60-69 years, female 197.3
GTEX-139TS-1426-SM-5IFJD 60-69 years, male 196.9
GTEX-13113-1326-SM-5GCOI 60-69 years, female 194.9
GTEX-13NZ9-1326-SM-5MR3V 50-59 years, male 193.7
GTEX-12WSM-0726-SM-5GCOW 60-69 years, male 192.8
GTEX-13NYB-1026-SM-5IFH3 40-49 years, male 192.7
GTEX-QEG4-1826-SM-4R1JN 30-39 years, male 191.6
GTEX-147F4-1426-SM-5LUA8 50-59 years, male 191.5
GTEX-RN64-1826-SM-48FDV 50-59 years, male 188.4
GTEX-YECK-1926-SM-4W21H 60-69 years, male 186.8
GTEX-1212Z-0226-SM-59HLF 60-69 years, male 185.7
GTEX-S33H-1626-SM-4AD68 30-39 years, male 184.8
GTEX-ZVT3-1626-SM-5GU66 60-69 years, female 184.0
GTEX-11ZVC-0726-SM-5FQT9 50-59 years, female 182.4
GTEX-ZYY3-0626-SM-5NQ6W 60-69 years, female 181.8
GTEX-13FTZ-0726-SM-5IFFY 60-69 years, male 181.6
GTEX-ZYT6-0626-SM-5E45V 30-39 years, male 180.6
GTEX-14753-1626-SM-5NQ9L 60-69 years, male 177.9
GTEX-T6MN-1226-SM-3NMA5 50-59 years, male 176.2
GTEX-REY6-1226-SM-48FDR 60-69 years, male 176.1
GTEX-139YR-0226-SM-5IFEM 50-59 years, male 174.2
GTEX-13112-1426-SM-5EGH8 50-59 years, male 173.9
GTEX-UTHO-2426-SM-4JBHD 60-69 years, male 173.7
GTEX-11NV4-1326-SM-5HL6V 60-69 years, male 173.3
GTEX-1269C-0626-SM-5FQSS 60-69 years, female 171.8
GTEX-11DXY-0526-SM-5EGGQ 60-69 years, male 171.4
GTEX-131YS-1626-SM-5HL6C 60-69 years, female 170.8
GTEX-14A5I-1726-SM-5QGQ5 50-59 years, female 168.1
GTEX-YFC4-1526-SM-5IFJS 40-49 years, female 165.5
GTEX-WZTO-0626-SM-4PQYY 40-49 years, male 162.9
GTEX-13NZB-0626-SM-5IFH6 30-39 years, male 162.6
GTEX-X261-1726-SM-4PQYT 50-59 years, male 161.4
GTEX-ZVT4-0626-SM-5E45T 50-59 years, female 161.1
GTEX-11NUK-1226-SM-5P9GM 50-59 years, male 158.5
GTEX-12696-0826-SM-5EGGE 60-69 years, male 155.8
GTEX-SJXC-1226-SM-4DM78 60-69 years, male 155.8
GTEX-11GSP-0626-SM-5986T 60-69 years, female 152.7
GTEX-1497J-0726-SM-5Q5D1 60-69 years, male 152.4
GTEX-X4XY-1626-SM-46MVN 60-69 years, male 151.3
GTEX-145LU-1326-SM-5LU9N 50-59 years, male 150.6
GTEX-13QJC-0726-SM-5RQJK 60-69 years, female 150.2
GTEX-12WSI-0226-SM-5GCNA 50-59 years, male 149.2
GTEX-XBEC-1526-SM-4AT68 50-59 years, male 148.9
GTEX-ZTPG-1426-SM-51MT3 20-29 years, female 147.8
GTEX-RNOR-1426-SM-48FDJ 50-59 years, female 145.4
GTEX-YEC4-0826-SM-5P9FV 40-49 years, male 143.3
GTEX-X4EO-1126-SM-4QARQ 60-69 years, female 142.4
GTEX-13O3O-1826-SM-5IFGW 60-69 years, female 141.0
GTEX-131XE-0326-SM-5LZVO 50-59 years, male 140.0
GTEX-Q2AG-1126-SM-48U1P 40-49 years, female 138.5
GTEX-11ZUS-2526-SM-59872 30-39 years, male 135.0
GTEX-14C38-1526-SM-5RQJ7 50-59 years, male 134.2
GTEX-RWSA-1426-SM-47JXA 40-49 years, male 131.1
GTEX-131XH-0626-SM-5LZWH 50-59 years, male 128.3
GTEX-12ZZZ-1326-SM-59HKW 60-69 years, male 81.7
Show all

LIVER - FANTOM5 CAGE

Average Tags Per Million

4458.1

FANTOM5 sample id

Sample description

Tags Per Million

Liver
Tags Per Million: 4458.1
FF:10018-101C9 64,69,70 years, mixed 4458.1

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.