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ABCB1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:17.4TPM
GTEx:4.5RPKM
FANTOM5:121.9Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Low
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA002199

  

Antibody CAB001716

  

Endothelial cells

 Not detected   Not detected  

Glandular cells

 Medium   Low  

Peripheral nerve/ganglion

 Not detected   Not detected  
   
   

COLON - HPA RNA-seq

Average TPM

17.4
overview Male, age 54 Sample 1
TPM: 8.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 17.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 12.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 31.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 17.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 3.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 18.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 26.2
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 4.7
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 17.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 33.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 19.5
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 15
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

4.5

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 1.3
Samples: 149

Max RPKM: 5.0
Min RPKM: 0.4
Std RPKM: 0.7
Median RPKM: 1.2
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 5.0
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 4.2
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 3.1
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 3.0
GTEX-145LS-2926-SM-5O99G 60-69 years, female 2.9
GTEX-13111-1926-SM-5GCOL 50-59 years, male 2.8
GTEX-13D11-0626-SM-5LZYY 50-59 years, female 2.8
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 2.8
GTEX-13X6K-2726-SM-5O9DG 60-69 years, female 2.8
GTEX-11PRG-2026-SM-5GU5F 50-59 years, male 2.5
Show all
Colon - Transverse
RPKM: 6.8
Samples: 196

Max RPKM: 39.4
Min RPKM: 0.5
Std RPKM: 7.1
Median RPKM: 4.0
GTEX-ZYWO-1626-SM-5E44H 40-49 years, female 39.4
GTEX-11P82-1026-SM-5BC5J 20-29 years, male 30.4
GTEX-ZT9W-1826-SM-51MQX 50-59 years, male 28.9
GTEX-ZVT2-1926-SM-5GU5T 50-59 years, female 27.7
GTEX-144GM-1226-SM-5LU52 20-29 years, male 27.3
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 27.1
GTEX-ZF2S-1926-SM-4WWAN 50-59 years, female 24.0
GTEX-UJHI-1126-SM-4IHLN 50-59 years, female 23.3
GTEX-ZPCL-1826-SM-57WF1 60-69 years, female 22.0
GTEX-1399S-1926-SM-5J2M5 30-39 years, female 21.9
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

121.9

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 121.9
FF:10014-101C5 62,83,84 years, mixed 121.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.