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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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CTTN
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    CELL

  • PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

GENERAL INFORMATION

Gene name

CTTN

Gene description

Cortactin

Protein class

Cancer-related genes
Plasma proteins
Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

4
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Expressed in all
HPA (cell line):Cell line enhanced (A-431)
HPA (normal tissue):Expressed in all

Protein evidence

Evidence at protein level

Protein expression
normal tissue

General cytoplasmic and membranous expression.

ANTIBODY IHC RELIABILITY

Data reliability
description

Antibody staining mainly consistent with RNA expression data.

Reliability score

Supported based on 2 antibodies.
HPA057242 , CAB011235
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PROGNOSTIC SUMMARY

Prognostic marker in head and neck cancer (unfavourable) and liver cancer (unfavourable).
Head and neck cancer p<0.001
Liver cancer p<0.001
Show all

RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Expressed in all

PROTEIN EXPRESSION

Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer
Liver cancer

STAINING SUMMARY

HPA057242
CAB011235

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Cancer tissues displayed moderate cytoplasmic and membranous positivity. A few cases of breast, prostate, head & neck, thyroid and urothelial cancers were strongly stained. Several lymphomas were negative.

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Most tumors showed moderate to strong positivity in the cytoplasm. Several gliomas and lymphomas showed weak staining or were negative.

GENE INFORMATION

Gene name

CTTN (HGNC Symbol)

Synonyms

EMS1

Description

Cortactin (HGNC Symbol)

Entrez gene summary

This gene is overexpressed in breast cancer and squamous cell carcinomas of the head and neck. The encoded protein is localized in the cytoplasm and in areas of the cell-substratum contacts. This gene has two roles: (1) regulating the interactions between components of adherens-type junctions and (2) organizing the cytoskeleton and cell adhesion structures of epithelia and carcinoma cells. During apoptosis, the encoded protein is degraded in a caspase-dependent manner. The aberrant regulation of this gene contributes to tumor cell invasion and metastasis. Three splice variants that encode different isoforms have been identified for this gene. [provided by RefSeq, May 2010]

Chromosome

11

Cytoband

q13.3

Chromosome location (bp)

70398404 - 70436584

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000085733 (version 83.38)

Entrez gene

2017

UniProt

Q14247 (UniProt - Evidence at protein level)

neXtProt

NX_Q14247

Antibodypedia

CTTN antibodies

PROTEIN BROWSER

CTTN-001
CTTN-002
CTTN-008
CTTN-016

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

CTTN-001
ENSP00000317189
ENST00000346329
Q14247 [Direct mapping]
Src substrate cortactin
A0A024R5M3 [Target identity:100%; Query identity:100%]
Cortactin, isoform CRA_c
Show all
Predicted intracellular proteins
Plasma proteins
Cancer-related genes
   Mutational cancer driver genes
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001726 [ruffle]
GO:0002102 [podosome]
GO:0005515 [protein binding]
GO:0005522 [profilin binding]
GO:0005737 [cytoplasm]
GO:0005856 [cytoskeleton]
GO:0005884 [actin filament]
GO:0005905 [coated pit]
GO:0005925 [focal adhesion]
GO:0005938 [cell cortex]
GO:0006886 [intracellular protein transport]
GO:0006898 [receptor-mediated endocytosis]
GO:0007264 [small GTPase mediated signal transduction]
GO:0008076 [voltage-gated potassium channel complex]
GO:0030027 [lamellipodium]
GO:0030041 [actin filament polymerization]
GO:0030426 [growth cone]
GO:0030516 [regulation of axon extension]
GO:0030838 [positive regulation of actin filament polymerization]
GO:0030863 [cortical cytoskeleton]
GO:0031532 [actin cytoskeleton reorganization]
GO:0043197 [dendritic spine]
GO:0045987 [positive regulation of smooth muscle contraction]
GO:0048041 [focal adhesion assembly]
GO:0048812 [neuron projection morphogenesis]
GO:0048870 [cell motility]
GO:0070062 [extracellular exosome]
GO:0097581 [lamellipodium organization]
Show all
513 aa
57.5 kDa
No 0
CTTN-002
ENSP00000301843
ENST00000301843
Q14247 [Direct mapping]
Src substrate cortactin
Show all
Predicted intracellular proteins
Plasma proteins
Cancer-related genes
   Mutational cancer driver genes
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001726 [ruffle]
GO:0002102 [podosome]
GO:0005515 [protein binding]
GO:0005522 [profilin binding]
GO:0005737 [cytoplasm]
GO:0005856 [cytoskeleton]
GO:0005884 [actin filament]
GO:0005905 [coated pit]
GO:0005925 [focal adhesion]
GO:0005938 [cell cortex]
GO:0006886 [intracellular protein transport]
GO:0006898 [receptor-mediated endocytosis]
GO:0007264 [small GTPase mediated signal transduction]
GO:0008076 [voltage-gated potassium channel complex]
GO:0030027 [lamellipodium]
GO:0030041 [actin filament polymerization]
GO:0030426 [growth cone]
GO:0030516 [regulation of axon extension]
GO:0030838 [positive regulation of actin filament polymerization]
GO:0030863 [cortical cytoskeleton]
GO:0031532 [actin cytoskeleton reorganization]
GO:0043197 [dendritic spine]
GO:0045987 [positive regulation of smooth muscle contraction]
GO:0048041 [focal adhesion assembly]
GO:0048812 [neuron projection morphogenesis]
GO:0048870 [cell motility]
GO:0070062 [extracellular exosome]
GO:0097581 [lamellipodium organization]
Show all
550 aa
61.6 kDa
No 0
CTTN-008
ENSP00000365745
ENST00000376561
Q14247 [Direct mapping]
Src substrate cortactin
Show all
Predicted intracellular proteins
Plasma proteins
Cancer-related genes
   Mutational cancer driver genes
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001726 [ruffle]
GO:0002102 [podosome]
GO:0005515 [protein binding]
GO:0005522 [profilin binding]
GO:0005737 [cytoplasm]
GO:0005856 [cytoskeleton]
GO:0005884 [actin filament]
GO:0005905 [coated pit]
GO:0005925 [focal adhesion]
GO:0005938 [cell cortex]
GO:0006886 [intracellular protein transport]
GO:0006898 [receptor-mediated endocytosis]
GO:0006930 [substrate-dependent cell migration, cell extension]
GO:0007264 [small GTPase mediated signal transduction]
GO:0008076 [voltage-gated potassium channel complex]
GO:0030027 [lamellipodium]
GO:0030041 [actin filament polymerization]
GO:0030426 [growth cone]
GO:0030516 [regulation of axon extension]
GO:0030838 [positive regulation of actin filament polymerization]
GO:0030863 [cortical cytoskeleton]
GO:0031532 [actin cytoskeleton reorganization]
GO:0043197 [dendritic spine]
GO:0045987 [positive regulation of smooth muscle contraction]
GO:0048041 [focal adhesion assembly]
GO:0048812 [neuron projection morphogenesis]
GO:0048870 [cell motility]
GO:0070062 [extracellular exosome]
GO:0097062 [dendritic spine maintenance]
GO:0097581 [lamellipodium organization]
GO:1903146 [regulation of mitophagy]
GO:1990023 [mitotic spindle midzone]
GO:2001237 [negative regulation of extrinsic apoptotic signaling pathway]
Show all
634 aa
71 kDa
No 0
CTTN-016
ENSP00000431421
ENST00000529736
H0YCD9 [Direct mapping]
Src substrate cortactin
Show all
Predicted intracellular proteins
Cancer-related genes
   Mutational cancer driver genes
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0030041 [actin filament polymerization]
Show all
265 aa
29.6 kDa
No 0

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