Tissue expression of SF3B2 - Staining in skin 1

SKIN - Expression summary

Protein expression

RNA expression

HPA:	98.8	TPM
GTEx:	51.6	RPKM

SKIN 1 - Annotated protein expression

Annotated protein
expression

Fibroblasts:	Medium
Keratinocytes:	High
Langerhans:	High
Melanocytes:	High

Antibody staining	Antibody HPA045028
Fibroblasts	Medium
Keratinocytes	High
Langerhans	High
Melanocytes	High

SKIN 2 - Annotated protein expression

Annotated protein
expression

Epidermal cells:	High

Antibody staining	Antibody HPA045028
Epidermal cells	High

SKIN - HPA RNA-seq

Average TPM	98.8

Female, age 34

Sample 1
TPM: 105.1

Cell types%

Keratinocytes: 60
Other cell types: 40

Female, age 30

Sample 2
TPM: 99.1

Cell types%

Keratinocytes: 55
Other cell types: 45

Male, age 57

Sample 3
TPM: 92.2

SKIN - GTEx RNA-seq

Average RPKM	51.6

GTEx sample id

Sample description

RPKM

Skin - Not Sun Exposed (Suprapubic)
RPKM: 49.4

Samples: 250

Max RPKM: 72.1
Min RPKM: 31.9
Std RPKM: 6.0
Median RPKM: 49.0

GTEX-1497J-0226-SM-5QGPU

60-69 years, male

72.1

GTEX-148VJ-0626-SM-5LUAW

70-79 years, male

70.5

GTEX-145MI-0626-SM-5SI8S

60-69 years, female

68.4

GTEX-WHSE-0126-SM-3NMBT

20-29 years, male

66.2

GTEX-X4EP-0626-SM-3P621

60-69 years, female

65.8

GTEX-X8HC-0626-SM-4E3HQ

50-59 years, female

63.8

GTEX-U8XE-0226-SM-4E3J3

30-39 years, male

63.5

GTEX-ZYW4-0626-SM-59HJR

60-69 years, male

63.2

GTEX-11WQK-1026-SM-5EQLX

50-59 years, male

63.1

GTEX-13OW5-2326-SM-5L3HO

60-69 years, male

62.5

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Skin - Sun Exposed (Lower leg)
RPKM: 53.2

Samples: 357

Max RPKM: 87.2
Min RPKM: 36.4
Std RPKM: 6.8
Median RPKM: 51.9

GTEX-OXRO-0126-SM-2YUN4

60-69 years, female

87.2

GTEX-U8T8-0126-SM-3DB94

60-69 years, male

75.3

GTEX-S7PM-0126-SM-4AD6S

60-69 years, male

73.9

GTEX-S7SF-1626-SM-3K2AY

20-29 years, female

73.7

GTEX-RVPU-2226-SM-2XCAQ

50-59 years, male

71.7

GTEX-ZAB4-0226-SM-5N9F5

40-49 years, male

71.2

GTEX-Y114-2426-SM-4TT8A

50-59 years, female

70.7

GTEX-X5EB-2226-SM-46MW4

40-49 years, male

69.8

GTEX-QESD-1426-SM-2S1R9

20-29 years, male

69.6

GTEX-NPJ8-0126-SM-2YUNR

40-49 years, male

69.3

Show all

SKIN - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue