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GCN1

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:16.7TPM
GTEx:14.4RPKM
FANTOM5:35.8Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Chondrocytes:Medium
Fibroblasts:Medium
Peripheral nerve:Low
 

Antibody staining

Antibody HPA018799

  

Antibody HPA019648

  

Antibody HPA024367

  

Adipocytes

 Not detected   Medium   Low  

Chondrocytes

 Medium   Medium   Medium  

Fibroblasts

 Low   Medium   Medium  

Peripheral nerve

 Not detected   Low   Not detected  
     
     
     

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Medium
Peripheral nerve:Low
 
 
 

Antibody staining

Antibody HPA018799

  

Antibody HPA019648

  

Antibody HPA024367

  

Adipocytes

 Low   Medium   Not detected  

Fibroblasts

 Not detected   High   Medium  

Peripheral nerve

 Not detected  
        
        
     
     
     

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

16.7
N/A Female, age 80 Sample 1
TPM: 18.4
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 11.9
N/A Female, age 57 Sample 3
TPM: 12
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 22.7
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 18.3
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

14.4

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 14.6
Samples: 350

Max RPKM: 25.8
Min RPKM: 6.5
Std RPKM: 2.7
Median RPKM: 14.3
GTEX-NPJ8-0226-SM-48TBN 40-49 years, male 25.8
GTEX-11EMC-2826-SM-5PNY6 60-69 years, female 25.4
GTEX-ZYY3-0226-SM-5E45M 60-69 years, female 24.2
GTEX-X8HC-0226-SM-4E3K1 50-59 years, female 22.7
GTEX-QEG5-0326-SM-2S1PB 20-29 years, male 21.8
GTEX-S3XE-1626-SM-3K2AJ 50-59 years, male 21.1
GTEX-TKQ1-1126-SM-4GIAZ 30-39 years, male 21.1
GTEX-11EQ8-0226-SM-5EQ5G 60-69 years, male 20.9
GTEX-OIZH-0226-SM-2YUMH 50-59 years, male 20.5
GTEX-PWCY-1926-SM-3NB25 20-29 years, female 20.3
Show all
Adipose - Visceral (Omentum)
RPKM: 14.0
Samples: 227

Max RPKM: 24.3
Min RPKM: 8.2
Std RPKM: 2.9
Median RPKM: 13.7
GTEX-11WQK-1526-SM-5EGKN 50-59 years, male 24.3
GTEX-13QBU-1326-SM-5LU4K 40-49 years, female 22.8
GTEX-13PVQ-2226-SM-5L3G9 50-59 years, male 22.6
GTEX-ZLV1-0926-SM-5S2MR 60-69 years, female 22.5
GTEX-Y5LM-0826-SM-4VDSW 40-49 years, female 21.7
GTEX-ZF3C-1026-SM-5S2OC 50-59 years, female 21.1
GTEX-XUJ4-1726-SM-4BONW 60-69 years, female 20.9
GTEX-111YS-1326-SM-5EGGK 60-69 years, male 20.6
GTEX-13N1W-1226-SM-5K7UM 70-79 years, male 20.6
GTEX-13S86-0926-SM-5SI6I 40-49 years, male 20.5
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

35.8

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 35.8
FF:10010-101C1 65,65,76 years, mixed 35.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.