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BIRC5

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:6.6TPM
GTEx:0.1RPKM
FANTOM5:8.6Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Low
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA002830

  

Antibody CAB004270

  

Endothelial cells

 Low   Not detected  

Glandular cells

 Low   Low  

Peripheral nerve/ganglion

 Not detected   Not detected  
   
   
   

COLON - HPA RNA-seq

Average TPM

6.6
overview Male, age 54 Sample 1
TPM: 8.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 4.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 7.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 4.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 4.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 7.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 12.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 6.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 6.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 8.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 5.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 5.3
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 3.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

0.1

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 0.0
Samples: 149

Max RPKM: 0.3
Min RPKM: 0.0
Std RPKM: 0.0
Median RPKM: 0.0
GTEX-V955-1726-SM-4JBHF 60-69 years, male 0.3
GTEX-11EQ9-1526-SM-5PNY7 30-39 years, male 0.2
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 0.2
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 0.2
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 0.2
GTEX-11ZTT-1626-SM-5EQKR 60-69 years, female 0.1
GTEX-12KS4-2326-SM-5EGJB 30-39 years, male 0.1
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 0.1
GTEX-145LS-2926-SM-5O99G 60-69 years, female 0.1
GTEX-145MO-2626-SM-5QGPD 60-69 years, male 0.1
Show all
Colon - Transverse
RPKM: 0.3
Samples: 196

Max RPKM: 1.9
Min RPKM: 0.0
Std RPKM: 0.3
Median RPKM: 0.1
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 1.9
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 1.6
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 1.5
GTEX-ZF2S-1926-SM-4WWAN 50-59 years, female 1.3
GTEX-144GN-1126-SM-5LU33 50-59 years, male 1.2
GTEX-QCQG-1626-SM-48U26 50-59 years, female 1.2
GTEX-145LT-0926-SM-5LU9C 40-49 years, male 1.1
GTEX-OXRK-1726-SM-3NB16 50-59 years, female 1.1
GTEX-1128S-1626-SM-5H12O 60-69 years, female 1.0
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 1.0
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

8.6

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 8.6
FF:10014-101C5 62,83,84 years, mixed 8.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.