Tissue expression of USP48 - Staining in adipose tissue

SOFT TISSUE - Expression summary

Protein expression

RNA expression

HPA:	23.1	TPM
GTEx:	9.3	RPKM
FANTOM5:	20.4	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Medium
Chondrocytes:	Medium
Fibroblasts:	Medium
Peripheral nerve:	Medium

Antibody staining	Antibody HPA030045	Antibody HPA030046
Adipocytes	Medium	Not detected
Chondrocytes	Medium
Fibroblasts	Medium	Not detected
Peripheral nerve	Medium	Not detected

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Fibroblasts:	Medium
Peripheral nerve:	Medium
Adipocytes:	Not available
Chondrocytes:	Not available

Antibody staining	Antibody HPA030045	Antibody HPA030046
Fibroblasts	Medium	Not detected
Peripheral nerve	Medium	Not detected
Adipocytes	Not detected
Chondrocytes	Not detected

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	23.1

Female, age 80

Sample 1
TPM: 24.4

Cell types%

Adipocytes: 95
Other cell types: 5

Female, age 45

Sample 2
TPM: 23.3

Female, age 57

Sample 3
TPM: 19.3

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

Female, age 74

Sample 4
TPM: 28.3

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

Female, age 59

Sample 5
TPM: 20.4

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	9.3

GTEx sample id

Sample description

RPKM

Adipose - Subcutaneous
RPKM: 10.1

Samples: 350

Max RPKM: 16.8
Min RPKM: 5.7
Std RPKM: 1.9
Median RPKM: 10.1

GTEX-12WSA-0326-SM-5BC6I

60-69 years, male

16.8

GTEX-TSE9-0226-SM-3DB84

60-69 years, female

15.7

GTEX-11EQ8-0226-SM-5EQ5G

60-69 years, male

15.5

GTEX-13PDP-0226-SM-5K7W9

60-69 years, male

15.5

GTEX-UTHO-0426-SM-5SI7N

60-69 years, male

15.0

GTEX-PX3G-0226-SM-3NB2C

20-29 years, female

14.8

GTEX-12WSC-0226-SM-5EQ52

50-59 years, male

14.4

GTEX-SNMC-1326-SM-2XCFK

20-29 years, male

14.4

GTEX-U3ZN-2626-SM-3DB7T

30-39 years, female

14.4

GTEX-11PRG-0626-SM-5BC56

50-59 years, male

14.3

Show all

Adipose - Visceral (Omentum)
RPKM: 8.0

Samples: 227

Max RPKM: 13.4
Min RPKM: 3.2
Std RPKM: 2.1
Median RPKM: 7.9

GTEX-13O3P-0926-SM-5IFFI

50-59 years, male

13.4

GTEX-11NV4-1426-SM-5BC4W

60-69 years, male

13.0

GTEX-132Q8-1726-SM-5EGK8

60-69 years, male

12.8

GTEX-12WSG-0426-SM-5FQSE

50-59 years, female

12.7

GTEX-11GS4-1026-SM-5N9DE

60-69 years, male

12.5

GTEX-11OF3-0826-SM-5BC51

60-69 years, male

12.2

GTEX-14A6H-1026-SM-5SIAZ

30-39 years, male

12.0

GTEX-11DXY-0326-SM-5H12F

60-69 years, male

11.9

GTEX-13X6I-1526-SM-5SIAC

60-69 years, male

11.9

GTEX-13NZ9-2026-SM-5KM1U

50-59 years, male

11.8

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	20.4

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 20.4

FF:10010-101C1

65,65,76 years, mixed

20.4