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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:50.5TPM
GTEx:35.1RPKM
FANTOM5:43.7Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Not detected
Peripheral nerve:Low
 
 

Antibody staining

Antibody HPA040870

  

Antibody CAB034261

  

Adipocytes

 Not detected   Low  

Fibroblasts

 Not detected   Not detected  

Peripheral nerve

 Not detected   Low  
      
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Chondrocytes:Medium
Fibroblasts:Not detected
Peripheral nerve:Low
 

Antibody staining

Antibody HPA040870

  

Antibody CAB034261

  

Adipocytes

 Not detected   Medium  

Chondrocytes

 Medium   Medium  

Fibroblasts

 Not detected   Not detected  

Peripheral nerve

 Not detected   Medium  
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

50.5
N/A Female, age 80 Sample 1
TPM: 51.5
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 43.6
N/A Female, age 57 Sample 3
TPM: 40.9
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 76.7
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 39.5
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

35.1

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 35.3
Samples: 350

Max RPKM: 115.2
Min RPKM: 18.1
Std RPKM: 9.8
Median RPKM: 33.7
GTEX-POYW-0726-SM-2XCEO 60-69 years, male 115.2
GTEX-OOBK-0226-SM-2YUMF 40-49 years, male 103.5
GTEX-XYKS-2726-SM-4E3IC 60-69 years, female 81.0
GTEX-YJ8A-0526-SM-5IFHT 20-29 years, male 68.9
GTEX-QEG5-0326-SM-2S1PB 20-29 years, male 67.6
GTEX-XXEK-2426-SM-4BRUS 50-59 years, male 67.0
GTEX-ZYVF-0226-SM-5GIEG 50-59 years, female 66.2
GTEX-13O3P-0226-SM-5KM3Z 50-59 years, male 63.3
GTEX-11H98-0226-SM-5NQ89 50-59 years, male 58.3
GTEX-11EMC-2826-SM-5PNY6 60-69 years, female 56.9
Show all
Adipose - Visceral (Omentum)
RPKM: 34.8
Samples: 227

Max RPKM: 120.5
Min RPKM: 14.1
Std RPKM: 12.0
Median RPKM: 32.3
GTEX-13IVO-2426-SM-5K7V9 70-79 years, male 120.5
GTEX-132AR-0526-SM-5J2MJ 50-59 years, female 97.1
GTEX-ZAJG-1626-SM-5HL7I 50-59 years, female 85.7
GTEX-XXEK-1426-SM-4BRW1 50-59 years, male 80.3
GTEX-13PDP-1226-SM-5K7TW 60-69 years, male 73.8
GTEX-13S86-0926-SM-5SI6I 40-49 years, male 69.0
GTEX-XYKS-1826-SM-4E3JV 60-69 years, female 65.3
GTEX-146FH-2026-SM-5SI9I 50-59 years, female 61.2
GTEX-12584-2126-SM-5FQUM 40-49 years, male 60.4
GTEX-1339X-0726-SM-5L3FF 40-49 years, male 54.9
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

43.7

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 43.7
FF:10010-101C1 65,65,76 years, mixed 43.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.