We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • HUMAN PATHOLOGY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
AC013461.1
  • TISSUE

  • premium

    CELL

  • PATHOLOGY

TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:26.6TPM
GTEx:10.6RPKM
FANTOM5:32.8Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:Medium
Myoepithelial cells:Medium
 

Antibody staining

Antibody HPA017205

 

Adipocytes

Not detected  

Glandular cells

Medium  

Myoepithelial cells

Medium  
 
 
 

BREAST - HPA RNA-seq

Average TPM

26.6

overview Female, age 52 Sample 1
TPM: 27
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80 Sample 2
TPM: 34.3
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47 Sample 3
TPM: 14.7
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38 Sample 4
TPM: 30.6
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

10.6

GTEx sample id

Sample description

RPKM

Breast - Mammary Tissue
RPKM: 10.6
Samples: 214

Max RPKM: 27.0
Min RPKM: 2.7
Std RPKM: 3.2
Median RPKM: 10.1
GTEX-W5X1-2326-SM-3GIL6 40-49 years, female 27.0
GTEX-12WSK-2226-SM-5GCO5 40-49 years, female 21.9
GTEX-YJ8O-2226-SM-5IFHW 40-49 years, female 21.3
GTEX-1314G-1226-SM-5BC6D 30-39 years, male 20.5
GTEX-144GL-2026-SM-5LU3O 50-59 years, male 19.1
GTEX-TKQ2-1826-SM-33HB2 50-59 years, male 19.1
GTEX-13W46-0826-SM-5LU3H 50-59 years, male 17.2
GTEX-13OW8-0226-SM-5K7UP 60-69 years, male 16.7
GTEX-145ME-1526-SM-5Q5F2 40-49 years, female 16.6
GTEX-ZUA1-1526-SM-59HLS 40-49 years, male 16.2
GTEX-11OF3-1926-SM-59889 60-69 years, male 16.1
GTEX-ZF3C-2326-SM-5S2MZ 50-59 years, female 15.8
GTEX-11DXY-2326-SM-5GICW 60-69 years, male 15.6
GTEX-11NV4-2026-SM-5N9DG 60-69 years, male 15.4
GTEX-ZYT6-0126-SM-5E45J 30-39 years, male 15.4
GTEX-11TUW-1826-SM-5BC5D 60-69 years, male 15.3
GTEX-13NZ8-0126-SM-5IJCT 60-69 years, female 15.3
GTEX-13O3Q-2226-SM-5KM4O 50-59 years, male 15.3
GTEX-R55F-1726-SM-2TF4R 50-59 years, male 15.2
GTEX-ZQUD-1926-SM-51MSA 30-39 years, male 15.1
GTEX-12WSM-1726-SM-5BC6J 60-69 years, male 14.8
GTEX-14E6E-1326-SM-5S2NR 30-39 years, male 14.6
GTEX-ZYFC-0826-SM-5E44K 50-59 years, male 14.3
GTEX-11O72-2126-SM-5N9FO 40-49 years, male 14.2
GTEX-13FHO-0826-SM-5L3E8 60-69 years, male 14.2
GTEX-X261-0626-SM-3NMD9 50-59 years, male 14.2
GTEX-Y5V5-2126-SM-4WWFO 60-69 years, female 14.2
GTEX-TMMY-0726-SM-33HBE 40-49 years, female 14.1
GTEX-WFON-1826-SM-3GILG 40-49 years, male 14.1
GTEX-R53T-1526-SM-48FEK 50-59 years, female 14.0
GTEX-TML8-1226-SM-32QON 40-49 years, female 14.0
GTEX-11ZUS-0826-SM-5FQUY 30-39 years, male 13.8
GTEX-QVJO-1826-SM-447C9 60-69 years, female 13.7
GTEX-RWS6-1926-SM-47JXY 60-69 years, female 13.5
GTEX-T2YK-2226-SM-32QPT 50-59 years, male 13.5
GTEX-146FH-0826-SM-5SI8T 50-59 years, female 13.4
GTEX-UPK5-2326-SM-3P5Z8 40-49 years, male 13.4
GTEX-13OW5-2226-SM-5L3HC 60-69 years, male 13.1
GTEX-132AR-0826-SM-5EGK6 50-59 years, female 12.8
GTEX-11ONC-2126-SM-5HL6E 60-69 years, male 12.7
GTEX-WYJK-1326-SM-3NB2T 50-59 years, male 12.7
GTEX-X4EP-2926-SM-3P5YQ 60-69 years, female 12.7
GTEX-ZDXO-0126-SM-5S2ND 60-69 years, male 12.7
GTEX-11EI6-0626-SM-5985T 60-69 years, male 12.6
GTEX-VJWN-0726-SM-3GIJ8 50-59 years, female 12.4
GTEX-XQ8I-2426-SM-4WAXY 50-59 years, male 12.4
GTEX-14753-2426-SM-5LU8U 60-69 years, male 12.3
GTEX-ZU9S-1926-SM-5NQBP 30-39 years, male 12.3
GTEX-11WQC-1726-SM-5GU4W 60-69 years, male 12.2
GTEX-UTHO-1026-SM-3GAF7 60-69 years, male 12.2
GTEX-WXYG-2226-SM-4E3IM 50-59 years, female 12.2
GTEX-11GSO-1926-SM-5A5K3 60-69 years, male 12.1
GTEX-12WSB-0626-SM-59HJO 60-69 years, female 12.1
GTEX-ZVZQ-0826-SM-51MRF 60-69 years, female 12.1
GTEX-13N1W-0626-SM-5MR4U 70-79 years, male 12.0
GTEX-WRHU-0326-SM-3MJFY 50-59 years, female 12.0
GTEX-XUJ4-1926-SM-4BOOV 60-69 years, female 12.0
GTEX-ZVT4-1026-SM-57WC4 50-59 years, female 12.0
GTEX-117XS-1926-SM-5GICO 60-69 years, male 11.9
GTEX-QMRM-1626-SM-4R1KV 50-59 years, male 11.9
GTEX-Y3I4-1526-SM-4TT7K 50-59 years, male 11.9
GTEX-S7SE-0826-SM-4AT4D 50-59 years, male 11.8
GTEX-XBED-1626-SM-47JYN 60-69 years, male 11.8
GTEX-144GM-0926-SM-5O994 20-29 years, male 11.7
GTEX-ZTX8-1226-SM-4YCE9 20-29 years, male 11.7
GTEX-13113-1726-SM-5GCOO 60-69 years, female 11.6
GTEX-U3ZH-1426-SM-4DXSR 30-39 years, male 11.5
GTEX-XV7Q-2326-SM-4BRVZ 40-49 years, female 11.5
GTEX-ZDYS-1126-SM-5K7UB 50-59 years, male 11.5
GTEX-ZYWO-2326-SM-5GZY4 40-49 years, female 11.5
GTEX-11NSD-0926-SM-5N9DR 20-29 years, male 11.4
GTEX-12ZZX-1126-SM-5EGKB 40-49 years, female 11.4
GTEX-XQ3S-1326-SM-4BOPQ 20-29 years, male 11.4
GTEX-Y3IK-2326-SM-4WWDT 50-59 years, female 11.4
GTEX-ZPIC-1126-SM-5BC7F 40-49 years, female 11.4
GTEX-1192X-2326-SM-5987X 50-59 years, male 11.3
GTEX-145MN-1926-SM-5SIAI 30-39 years, male 11.2
GTEX-S33H-0326-SM-4AD6N 30-39 years, male 11.2
GTEX-T6MO-0326-SM-32QOK 40-49 years, female 11.2
GTEX-13PVQ-1026-SM-5KM3M 50-59 years, male 11.1
GTEX-QDT8-0626-SM-48TYW 30-39 years, female 11.1
GTEX-11DXZ-1926-SM-5GZZL 50-59 years, male 11.0
GTEX-1211K-1926-SM-5EQLB 60-69 years, female 11.0
GTEX-13FTX-1126-SM-5N9EN 20-29 years, female 11.0
GTEX-WI4N-1426-SM-3LK7H 40-49 years, female 11.0
GTEX-Y8LW-1626-SM-5IFHX 50-59 years, female 11.0
GTEX-ZF29-1926-SM-5S2P1 60-69 years, female 11.0
GTEX-11P81-1926-SM-5BC53 30-39 years, female 10.9
GTEX-11WQK-2426-SM-5GU5C 50-59 years, male 10.9
GTEX-Y111-2026-SM-4SOJA 50-59 years, male 10.9
GTEX-1313W-0826-SM-5EQ4T 50-59 years, female 10.8
GTEX-X4XY-0926-SM-4E3JD 60-69 years, male 10.8
GTEX-YEC3-1026-SM-5IFI5 50-59 years, male 10.8
GTEX-11DXW-0626-SM-5N9ER 40-49 years, male 10.7
GTEX-RUSQ-2026-SM-4GIAK 50-59 years, male 10.7
GTEX-XMK1-1126-SM-4IHJ8 40-49 years, male 10.7
GTEX-ZAJG-0626-SM-5HL8X 50-59 years, female 10.7
GTEX-12KS4-0126-SM-5Q5A5 30-39 years, male 10.6
GTEX-XYKS-1326-SM-4BRUN 60-69 years, female 10.6
GTEX-ZWKS-2826-SM-5NQ74 30-39 years, male 10.5
GTEX-117YX-1426-SM-5H12H 50-59 years, male 10.4
GTEX-11P7K-0726-SM-5EGKX 30-39 years, male 10.4
GTEX-12WSN-1326-SM-5GCNT 40-49 years, male 10.4
GTEX-TKQ1-0226-SM-33HB5 30-39 years, male 10.4
GTEX-Y9LG-1426-SM-5IFJZ 30-39 years, male 10.4
GTEX-WYBS-0926-SM-3NM94 60-69 years, female 10.2
GTEX-Y5V6-2126-SM-4WWFX 60-69 years, male 10.2
GTEX-YB5K-1626-SM-5IFIN 40-49 years, female 10.1
GTEX-ZZPU-0626-SM-5E43T 50-59 years, female 10.1
GTEX-1117F-2826-SM-5GZXL 60-69 years, female 10.0
GTEX-13O3P-0826-SM-5L3DH 50-59 years, male 10.0
GTEX-T5JC-2126-SM-32PMO 20-29 years, male 10.0
GTEX-11GS4-2126-SM-5A5KR 60-69 years, male 9.9
GTEX-RU72-0626-SM-46MUI 50-59 years, female 9.9
GTEX-Y114-2026-SM-4TT7L 50-59 years, female 9.9
GTEX-132NY-0826-SM-5K7Y7 60-69 years, male 9.7
GTEX-13W3W-1226-SM-5LU4H 60-69 years, female 9.7
GTEX-147F4-2826-SM-5NQBN 50-59 years, male 9.7
GTEX-S32W-2026-SM-4AD6E 50-59 years, female 9.7
GTEX-ZY6K-1626-SM-5GZWV 50-59 years, male 9.7
GTEX-11ZTT-2326-SM-5EQLG 60-69 years, female 9.6
GTEX-S341-1526-SM-4AD6K 40-49 years, female 9.6
GTEX-ZLV1-1426-SM-4WWES 60-69 years, female 9.6
GTEX-S4P3-1326-SM-4AD6V 50-59 years, female 9.5
GTEX-U412-1826-SM-4DXTJ 60-69 years, male 9.5
GTEX-ZV6S-1826-SM-5NQ8D 40-49 years, female 9.5
GTEX-1122O-1226-SM-5H113 60-69 years, female 9.4
GTEX-13S86-1226-SM-5S2OA 40-49 years, male 9.4
GTEX-QEG5-0726-SM-4R1JQ 20-29 years, male 9.4
GTEX-XMD1-0826-SM-4AT52 60-69 years, male 9.4
GTEX-ZVTK-0326-SM-51MRR 20-29 years, male 9.3
GTEX-UJHI-1426-SM-3DB9C 50-59 years, female 9.2
GTEX-WOFL-0826-SM-3MJG1 60-69 years, male 9.2
GTEX-Y8E4-1626-SM-5S2MW 40-49 years, male 9.2
GTEX-ZAB4-2526-SM-5HL8M 40-49 years, male 9.2
GTEX-ZEX8-2226-SM-57WC6 50-59 years, male 9.2
GTEX-ZTTD-1026-SM-51MRD 50-59 years, male 9.2
GTEX-ZV7C-1826-SM-5NQ83 50-59 years, male 9.2
GTEX-11DZ1-0326-SM-5N9BN 50-59 years, male 9.1
GTEX-R55D-0826-SM-48FEA 50-59 years, male 9.1
GTEX-ZDTT-2126-SM-5S2OJ 60-69 years, male 9.1
GTEX-11EQ9-1826-SM-5Q5AJ 30-39 years, male 9.0
GTEX-145MO-0826-SM-5NQBL 60-69 years, male 9.0
GTEX-ZLFU-2126-SM-4WWEV 40-49 years, male 9.0
GTEX-12BJ1-1826-SM-5HL9N 60-69 years, male 8.9
GTEX-QEL4-2126-SM-447AE 50-59 years, male 8.8
GTEX-111YS-1926-SM-5GICC 60-69 years, male 8.7
GTEX-13QIC-2326-SM-5LU5N 60-69 years, female 8.7
GTEX-T2IS-1526-SM-32QPR 20-29 years, female 8.7
GTEX-REY6-2426-SM-48FF5 60-69 years, male 8.6
GTEX-XUW1-2326-SM-4BOO5 50-59 years, female 8.6
GTEX-ZYW4-0826-SM-5GIDG 60-69 years, male 8.6
GTEX-13CF3-2126-SM-5IFJP 60-69 years, female 8.5
GTEX-T6MN-0726-SM-32PML 50-59 years, male 8.5
GTEX-WYVS-1726-SM-3NMAY 40-49 years, female 8.5
GTEX-XMD2-0926-SM-4WWEF 60-69 years, female 8.5
GTEX-ZZ64-1226-SM-5E43R 20-29 years, male 8.5
GTEX-11EM3-1326-SM-5N9C6 20-29 years, female 8.4
GTEX-11PRG-0826-SM-5EQ6A 50-59 years, male 8.4
GTEX-139TU-0626-SM-5KM3X 60-69 years, male 8.4
GTEX-13O3O-0826-SM-5K7WE 60-69 years, female 8.4
GTEX-SE5C-2126-SM-4BRUJ 40-49 years, female 8.4
GTEX-ZA64-1526-SM-5CVMD 20-29 years, male 8.4
GTEX-ZF2S-2026-SM-5E461 50-59 years, female 8.4
GTEX-139T6-1626-SM-5PNYZ 50-59 years, male 8.3
GTEX-Q2AG-0326-SM-48U1O 40-49 years, female 8.3
GTEX-13FTW-1426-SM-5LZWZ 40-49 years, male 8.2
GTEX-XGQ4-0926-SM-4AT4U 50-59 years, male 8.2
GTEX-Y5LM-1726-SM-4VDSX 40-49 years, female 8.2
GTEX-ZVE2-1226-SM-5NQ8R 50-59 years, male 8.2
GTEX-11LCK-2426-SM-5HL5F 30-39 years, male 8.1
GTEX-13N11-1726-SM-5J1OJ 50-59 years, female 8.1
GTEX-13CF2-2026-SM-5K7VI 60-69 years, male 8.0
GTEX-13O61-1826-SM-5KM4I 60-69 years, male 8.0
GTEX-VUSG-2226-SM-4KKZO 50-59 years, male 7.9
GTEX-XOT4-0726-SM-4GIAW 60-69 years, female 7.9
GTEX-YFCO-1826-SM-4W1YH 40-49 years, male 7.9
GTEX-13PL6-2926-SM-5L3I2 40-49 years, female 7.8
GTEX-S4Q7-1126-SM-4AD6R 20-29 years, male 7.8
GTEX-U3ZN-1926-SM-4DXSG 30-39 years, female 7.8
GTEX-YFC4-1426-SM-5IFJG 40-49 years, female 7.8
GTEX-ZC5H-2626-SM-5J2MG 40-49 years, female 7.8
GTEX-PSDG-1626-SM-48TCQ 50-59 years, male 7.6
GTEX-S4UY-0726-SM-4AD6X 40-49 years, female 7.6
GTEX-ZQG8-0726-SM-5P9H9 60-69 years, female 7.6
GTEX-13D11-1026-SM-5IJFB 50-59 years, female 7.5
GTEX-13NZ9-1026-SM-5MR5K 50-59 years, male 7.5
GTEX-R3RS-0626-SM-48FE1 40-49 years, female 7.5
GTEX-U8XE-0826-SM-4E3J1 30-39 years, male 7.5
GTEX-1269C-2426-SM-5FQSN 60-69 years, female 7.4
GTEX-139T8-0826-SM-5L3DE 60-69 years, male 7.4
GTEX-WY7C-2726-SM-3NB3P 50-59 years, male 7.3
GTEX-133LE-1726-SM-5K7VQ 20-29 years, female 7.1
GTEX-131YS-0626-SM-5EGKL 60-69 years, female 7.0
GTEX-145LT-0726-SM-5S2VM 40-49 years, male 6.9
GTEX-X15G-1626-SM-3NMB3 50-59 years, female 6.9
GTEX-11I78-2226-SM-5PNYA 50-59 years, female 6.6
GTEX-YB5E-1726-SM-5IFJ3 40-49 years, male 6.6
GTEX-1399U-1826-SM-5PNZ1 50-59 years, female 6.5
GTEX-13NZB-2126-SM-5MR4Y 30-39 years, male 6.5
GTEX-11TT1-2126-SM-5GU5Y 20-29 years, male 6.3
GTEX-ZVT2-1826-SM-5NQ8W 50-59 years, female 6.3
GTEX-11P82-1326-SM-5HL62 20-29 years, male 6.0
GTEX-131XW-0726-SM-5EGK3 50-59 years, female 5.9
GTEX-14AS3-1626-SM-5S2OY 40-49 years, female 5.7
GTEX-ZXES-0826-SM-5E43C 30-39 years, female 5.7
GTEX-132Q8-1426-SM-5EGK7 60-69 years, male 5.5
GTEX-13FTY-2226-SM-5J1ND 40-49 years, female 5.4
GTEX-11EMC-2026-SM-5A5JV 60-69 years, female 5.3
GTEX-ZT9W-2026-SM-51MRA 50-59 years, male 5.3
GTEX-SIU7-1626-SM-4BRUK 50-59 years, male 5.0
GTEX-XUZC-1626-SM-4BRVP 30-39 years, female 5.0
GTEX-T5JW-2026-SM-4DM63 20-29 years, female 4.9
GTEX-14ABY-2126-SM-5QGQZ 50-59 years, male 2.7
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

32.8

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 32.8
FF:10080-102A8 77 years, female 32.8

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.