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AC013461.1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:19.6TPM
GTEx:24.9RPKM
FANTOM5:86.7Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Medium
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA017205

  

Endothelial cells

 Not detected  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 Not detected  
 
 
 

COLON - HPA RNA-seq

Average TPM

19.6
overview Male, age 54 Sample 1
TPM: 16.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 14.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 4.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 19.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 13.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 36.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 13.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 8.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 43.9
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 8.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 22.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 35.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 17.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

24.9

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 35.5
Samples: 149

Max RPKM: 75.2
Min RPKM: 10.4
Std RPKM: 13.2
Median RPKM: 33.5
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 75.2
GTEX-14BMU-1326-SM-5RQIH 20-29 years, female 72.3
GTEX-12BJ1-2026-SM-5FQUH 60-69 years, male 71.0
GTEX-13FH7-1626-SM-5J2O9 50-59 years, female 68.5
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 67.0
GTEX-117YX-0526-SM-5EGJH 50-59 years, male 63.1
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 60.7
GTEX-ZLV1-1326-SM-4WWER 60-69 years, female 57.4
GTEX-13O61-1526-SM-5KM3P 60-69 years, male 56.6
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 56.3
Show all
Colon - Transverse
RPKM: 16.8
Samples: 196

Max RPKM: 71.3
Min RPKM: 0.8
Std RPKM: 16.5
Median RPKM: 11.0
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 71.3
GTEX-13CF3-1426-SM-5K7YY 60-69 years, female 68.6
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 64.4
GTEX-T6MO-0826-SM-4DM51 40-49 years, female 58.9
GTEX-12WSL-1626-SM-5GCMU 50-59 years, male 58.3
GTEX-QLQ7-1126-SM-4R1KN 60-69 years, male 53.4
GTEX-12WSJ-1526-SM-5GCNI 40-49 years, female 51.7
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 50.6
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 49.4
GTEX-OXRL-1426-SM-3NM9E 50-59 years, male 48.6
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

86.7

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 86.7
FF:10014-101C5 62,83,84 years, mixed 86.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.