Tissue expression of PHGDH - Staining in caudate

CAUDATE - Expression summary

Protein expression

RNA expression

GTEx:	27.6	RPKM
FANTOM5:	90.4	Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:	High
Neuronal cells:	Low

Antibody staining	Antibody HPA021241	Antibody HPA024031	Antibody CAB003681	Antibody CAB068216
Glial cells	High	High	High	High
Neuronal cells	Low	Not detected	Low

CAUDATE - HPA RNA-seq
Pending HPA RNA-seq analysis

CAUDATE - GTEx RNA-seq

Average RPKM	27.6

GTEx sample id

Sample description

RPKM

Brain - Caudate (basal ganglia)
RPKM: 27.6

Samples: 117

Max RPKM: 65.2
Min RPKM: 8.1
Std RPKM: 7.7
Median RPKM: 26.9

GTEX-12WSA-0011-R5b-SM-5GU5I

60-69 years, male

65.2

GTEX-13FLV-0011-R5a-SM-5LZWT

50-59 years, male

47.2

GTEX-13OW8-0011-R5b-SM-5L3FQ

60-69 years, male

46.4

GTEX-13JVG-0011-R5a-SM-5MR4O

60-69 years, male

44.6

GTEX-13JUV-0011-R5a-SM-5LZY5

40-49 years, female

41.2

GTEX-12WSB-0011-R5b-SM-5GU67

60-69 years, female

41.1

GTEX-11GSP-0011-R5a-SM-57WBE

60-69 years, female

39.3

GTEX-139T8-0011-R5b-SM-5J1MO

60-69 years, male

38.9

GTEX-13OVJ-0011-R5a-SM-5P9H7

50-59 years, female

38.7

GTEX-XOTO-0011-R5A-SM-4B657

50-59 years, male

38.5

Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million	90.4

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 93.0

FF:10164-103B2

76 years, female

93.0