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PHGDH

ESOPHAGUS - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:53.8TPM
GTEx:12.7RPKM
FANTOM5:49.2Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:High
 

Antibody staining

Antibody HPA021241

  

Antibody HPA024031

  

Antibody CAB003681

  

Antibody CAB068216

  

Squamous epithelial cells

 High   High   Not detected   High  
       
       
       

ESOPHAGUS - HPA RNA-seq

Average TPM

53.8
overview Female, age 70 Sample 1
TPM: 60.4
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38 Sample 2
TPM: 47
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76 Sample 3
TPM: 54.1
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

12.7

GTEx sample id

Sample description

RPKM
Esophagus - Mucosa
RPKM: 12.7
Samples: 286

Max RPKM: 34.0
Min RPKM: 3.3
Std RPKM: 5.6
Median RPKM: 11.7
GTEX-ZTPG-1626-SM-5DUX2 20-29 years, female 34.0
GTEX-VJYA-0726-SM-4KL1T 60-69 years, male 32.5
GTEX-XYKS-1526-SM-4BRUP 60-69 years, female 30.2
GTEX-144GO-2726-SM-5O9A2 60-69 years, male 30.1
GTEX-QLQW-0526-SM-4R1KS 30-39 years, male 30.1
GTEX-RU72-0726-SM-46MUW 50-59 years, female 29.5
GTEX-UPK5-1226-SM-4IHL8 40-49 years, male 28.8
GTEX-11TT1-0526-SM-5P9JO 20-29 years, male 28.5
GTEX-U3ZH-1026-SM-4DXUZ 30-39 years, male 27.6
GTEX-146FH-1726-SM-5QGQ2 50-59 years, female 27.2
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

49.2

FANTOM5 sample id

Sample description

Tags Per Million
Esophagus
Tags Per Million: 49.2
FF:10015-101C6 68,74,75 years, mixed 49.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.