Tissue expression of HCN2 - Staining in cerebral cortex

CEREBRAL CORTEX - Expression summary

RNA expression

HPA:	38.5	TPM
GTEx:	50.1	RPKM

CEREBRAL CORTEX - Annotated protein expression
Pending normal tissue analysis

CEREBRAL CORTEX - HPA RNA-seq

Average TPM	38.5

Male, age 5

Sample 1
TPM: 33.1

Female, age 40

Sample 2
TPM: 29.7

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

Male, age 70

Sample 3
TPM: 52.6

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM	50.1

GTEx sample id

Sample description

RPKM

Brain - Cortex
RPKM: 54.8

Samples: 114

Max RPKM: 91.9
Min RPKM: 27.7
Std RPKM: 13.4
Median RPKM: 55.8

GTEX-11NV4-2126-SM-5N9DS

60-69 years, male

91.9

GTEX-13O3Q-2926-SM-5KM45

50-59 years, male

86.2

GTEX-145MF-2726-SM-5O995

50-59 years, male

84.8

GTEX-Y111-2726-SM-4TT3N

50-59 years, male

82.5

GTEX-11OC5-0726-SM-5P9JK

60-69 years, male

76.6

GTEX-13SLX-3126-SM-5S2Q5

50-59 years, female

74.8

GTEX-Z93S-2926-SM-57WB9

50-59 years, male

73.7

GTEX-14ASI-3026-SM-5S2PN

60-69 years, male

73.0

GTEX-13VXU-2926-SM-5LU5C

50-59 years, male

72.1

GTEX-X585-3026-SM-46MWF

50-59 years, male

71.9

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Brain - Frontal Cortex (BA9)
RPKM: 45.1

Samples: 108

Max RPKM: 73.8
Min RPKM: 9.7
Std RPKM: 14.6
Median RPKM: 45.3

GTEX-12ZZZ-0011-R10a-SM-5P9HC

60-69 years, male

73.8

GTEX-13OW7-0011-R10a-SM-5L3H3

50-59 years, male

68.7

GTEX-12WSC-0011-R10a-SM-5GU57

50-59 years, male

67.9

GTEX-13G51-0011-R10b-SM-5LZYF

60-69 years, male

67.9

GTEX-ZF28-0011-R10a-SM-4WWEH

60-69 years, male

66.9

GTEX-NL3H-0011-R10A-SM-2I3E9

60-69 years, male

66.8

GTEX-147GR-0011-R10b-SM-5S2UM

60-69 years, male

66.1

GTEX-13N1W-0011-R10b-SM-5MR4H

70-79 years, male

65.6

GTEX-145LS-0011-R10a-SM-5PNUQ

60-69 years, female

65.3

GTEX-12WSM-0011-R10a-SM-5DUWV

60-69 years, male

65.0

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CEREBRAL CORTEX - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue