Tissue expression of SLC5A1 - Staining in skin - The Human Protein Atlas

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SLC5A1

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TISSUE

CELL

PATHOLOGY

TISSUE ATLAS PRIMARY DATA SKIN

GENE/PROTEIN

Antibody validation

Dictionary
	Skin
	Anal skin


Tissue proteome
	Extended skin samples
	Skin

SKIN - Expression summary

Protein expression

h

m

l

n

RNA expression

HPA:	11.4	TPM
GTEx:	10.2	RPKM

SKIN 1 - Annotated protein expression

Annotated protein
expression

Fibroblasts:	Not detected
Keratinocytes:	Not detected
Langerhans:	Not detected
Melanocytes:	Not detected

Antibody staining	Antibody HPA051805		Antibody HPA055106		Antibody CAB015467
Fibroblasts	Not detected		Not detected		Not detected
Keratinocytes	Not detected		Not detected		Not detected
Langerhans	Not detected		Not detected		Not detected
Melanocytes	Not detected		Not detected		Not detected

SKIN 2 - Annotated protein expression

Annotated protein
expression

Epidermal cells:	Not detected

Antibody staining	Antibody HPA051805		Antibody HPA055106		Antibody CAB015467
Epidermal cells	Not detected		Not detected		Not detected

SKIN - HPA RNA-seq

Average TPM	11.4

overview

Female, age 34

Sample 1
TPM: 15.4

Cell types%

Keratinocytes: 60
Other cell types: 40

overview

Female, age 30

Sample 2
TPM: 11.8

Cell types%

Keratinocytes: 55
Other cell types: 45

N/A

Male, age 57

Sample 3
TPM: 7

SKIN - GTEx RNA-seq

Average RPKM	10.2

GTEx sample id

Sample description

RPKM

Skin - Not Sun Exposed (Suprapubic)
RPKM: 10.3

Samples: 250

Max RPKM: 53.8
Min RPKM: 2.9
Std RPKM: 4.7
Median RPKM: 9.2

GTEX-ZY6K-1426-SM-5GZX2

50-59 years, male

53.8

GTEX-1399S-0126-SM-5IJCF

30-39 years, female

27.5

GTEX-ZYWO-2226-SM-5GZXR

40-49 years, female

24.2

GTEX-ZP4G-1426-SM-4WWCL

20-29 years, female

23.0

GTEX-YECK-0326-SM-4W1YS

60-69 years, male

22.0

GTEX-ZLFU-1826-SM-4WWBV

40-49 years, male

21.5

GTEX-ZT9X-1526-SM-5DUXD

40-49 years, male

21.4

GTEX-12WSK-2126-SM-5CVNC

40-49 years, female

20.6

GTEX-13OVH-0526-SM-5L3E6

70-79 years, male

20.1

GTEX-ZVZP-1226-SM-5GID7

50-59 years, male

19.9

Show all

Skin - Sun Exposed (Lower leg)
RPKM: 10.2

Samples: 357

Max RPKM: 50.2
Min RPKM: 1.0
Std RPKM: 4.2
Median RPKM: 9.5

GTEX-11TT1-2526-SM-5EGIB

20-29 years, male

50.2

GTEX-13OVH-0126-SM-5MR4B

70-79 years, male

26.9

GTEX-ZXES-1826-SM-5E43S

30-39 years, female

25.9

GTEX-11WQK-0526-SM-5EQLD

50-59 years, male

23.9

GTEX-145MN-2226-SM-5SIAU

30-39 years, male

23.5

GTEX-T5JW-1626-SM-3GADZ

20-29 years, female

21.1

GTEX-1122O-2126-SM-5EGIR

60-69 years, female

21.0

GTEX-WFG8-2226-SM-3GIL9

20-29 years, male

20.3

GTEX-PSDG-0226-SM-33HC1

50-59 years, male

19.9

GTEX-13RTJ-2426-SM-5S2Q2

60-69 years, male

19.4

Show all

SKIN - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.