Tissue expression of CHGA - Staining in adipose tissue - The Human Protein Atlas

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CHGA

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TISSUE

CELL

PATHOLOGY

TISSUE ATLAS PRIMARY DATA ADIPOSE TISSUE

GENE/PROTEIN

Antibody validation

Dictionary
	Soft tissue


Tissue proteome
	Adipose

SOFT TISSUE - Expression summary

Protein expression

h

m

l

n

RNA expression

HPA:	6.9	TPM
GTEx:	0.1	RPKM
FANTOM5:	0.0	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Fibroblasts:	Not detected
Peripheral nerve:	Not detected
Chondrocytes:	Not detected

Antibody staining	Antibody HPA017369		Antibody CAB000023		Antibody CAB040544		Antibody CAB055506
Adipocytes	Not detected		Not detected		Not detected		Not detected
Fibroblasts	Not detected		Not detected		Not detected		Not detected
Peripheral nerve	Not detected
Chondrocytes	Not detected

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Fibroblasts:	Not detected
Peripheral nerve:	Not detected
Chondrocytes:	Not detected

Antibody staining	Antibody HPA017369		Antibody CAB000023		Antibody CAB040544		Antibody CAB055506		Antibody CAB058688
Adipocytes	Not detected		Medium		Not detected		Not detected		Not detected
Fibroblasts	Not detected		Not detected		Not detected		Not detected		Not detected
Peripheral nerve	Medium		Not detected		Not detected		Not detected		Not detected
Chondrocytes	Not detected

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	6.9

N/A

Female, age 80

Sample 1
TPM: 2.2

Cell types%

Adipocytes: 95
Other cell types: 5

N/A

Female, age 45

Sample 2
TPM: 5.4

N/A

Female, age 57

Sample 3
TPM: 26.9

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

overview

Female, age 74

Sample 4
TPM: 0

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

overview

Female, age 59

Sample 5
TPM: 0

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	0.1

GTEx sample id

Sample description

RPKM

Adipose - Subcutaneous
RPKM: 0.0

Samples: 350

Max RPKM: 8.1
Min RPKM: 0.0
Std RPKM: 0.4
Median RPKM: 0.0

GTEX-ZDXO-2426-SM-5S2NJ

60-69 years, male

8.1

GTEX-145LS-0226-SM-5O9A5

60-69 years, female

1.1

GTEX-WVJS-0226-SM-4MVOU

50-59 years, male

0.8

GTEX-11EM3-2326-SM-5H12B

20-29 years, female

0.5

GTEX-13FTW-2526-SM-5IJC8

40-49 years, male

0.5

GTEX-P4QS-0226-SM-3NB1U

60-69 years, male

0.5

GTEX-139TU-0226-SM-5J1NM

60-69 years, male

0.4

GTEX-145ME-1926-SM-5SI9S

40-49 years, female

0.4

GTEX-T2IS-0226-SM-32QPH

20-29 years, female

0.3

GTEX-W5X1-2626-SM-4LMI8

40-49 years, female

0.3

Show all

Adipose - Visceral (Omentum)
RPKM: 0.1

Samples: 227

Max RPKM: 2.1
Min RPKM: 0.0
Std RPKM: 0.2
Median RPKM: 0.0

GTEX-13X6I-1526-SM-5SIAC

60-69 years, male

2.1

GTEX-12WSI-1526-SM-5GCNM

50-59 years, male

1.7

GTEX-WWTW-1326-SM-4MVNT

50-59 years, male

1.2

GTEX-11DXY-0326-SM-5H12F

60-69 years, male

0.9

GTEX-13N11-1826-SM-5IJDS

50-59 years, female

0.7

GTEX-13O3P-0926-SM-5IFFI

50-59 years, male

0.7

GTEX-146FR-0226-SM-5Q5F6

60-69 years, female

0.6

GTEX-YECK-1426-SM-5IFHE

60-69 years, male

0.5

GTEX-1399T-1326-SM-5PNVH

60-69 years, male

0.4

GTEX-ZV7C-0826-SM-59HK8

50-59 years, male

0.4

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	0.0

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 0.0

65,65,76 years, mixed

0.0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.