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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:61.7TPM
GTEx:128.3RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Not detected
Neuronal cells:Low
Neuropil:Not detected
 

Antibody staining

Antibody HPA017369

 

Antibody CAB000023

 

Antibody CAB040544

 

Antibody CAB055506

 

Antibody CAB058688

 

Endothelial cells

Not detected   Not detected   Not detected   Not detected   Not detected  

Glial cells

Not detected   Not detected   Not detected   Not detected   Not detected  

Neuronal cells

Not detected   Low   Medium   Not detected   Medium  

Neuropil

Not detected   Not detected   Not detected   Not detected   Not detected  
         
         
         

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

61.7

N/A Male, age 5 Sample 1
TPM: 65.7
overview Female, age 40 Sample 2
TPM: 27.1
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70 Sample 3
TPM: 92.2
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

128.3

GTEx sample id

Sample description

RPKM

Brain - Cortex
RPKM: 110.0
Samples: 114

Max RPKM: 298.7
Min RPKM: 2.7
Std RPKM: 45.5
Median RPKM: 105.6
GTEX-X585-3026-SM-46MWF 50-59 years, male 298.7
GTEX-117XS-3026-SM-5N9CA 60-69 years, male 208.9
GTEX-13NYS-3126-SM-5KLYV 60-69 years, male 200.4
GTEX-13SLX-3126-SM-5S2Q5 50-59 years, female 193.2
GTEX-13O3O-3126-SM-5KM3H 60-69 years, female 190.0
GTEX-145LS-3126-SM-5Q5BY 60-69 years, female 184.7
GTEX-11ONC-2926-SM-5P9JM 60-69 years, male 177.4
GTEX-11DXY-3226-SM-5GIDE 60-69 years, male 173.8
GTEX-X4XX-3026-SM-3NMB2 60-69 years, male 172.7
GTEX-11O72-2926-SM-5BC4V 40-49 years, male 168.3
GTEX-13OW8-2826-SM-5L3GC 60-69 years, male 167.8
GTEX-13OVH-3026-SM-5MR4N 70-79 years, male 161.6
GTEX-12WSC-3026-SM-5GCNF 50-59 years, male 161.2
GTEX-132Q8-3026-SM-5PNVG 60-69 years, male 161.0
GTEX-TSE9-3026-SM-3DB76 60-69 years, female 160.5
GTEX-ZYFD-3026-SM-5E44C 50-59 years, male 160.0
GTEX-XOTO-3026-SM-4B65M 50-59 years, male 155.6
GTEX-14BMV-3026-SM-5S2PQ 50-59 years, male 151.2
GTEX-T5JC-2426-SM-3NMDB 20-29 years, male 149.8
GTEX-WL46-2926-SM-3LK82 50-59 years, male 149.0
GTEX-T6MN-2626-SM-32PMQ 50-59 years, male 145.5
GTEX-1128S-2726-SM-5H12C 60-69 years, female 144.2
GTEX-ZZPT-3026-SM-5GZXH 50-59 years, male 143.4
GTEX-1313W-3126-SM-5LZUI 50-59 years, female 143.2
GTEX-Z93S-2926-SM-57WB9 50-59 years, male 141.3
GTEX-14ASI-3026-SM-5S2PN 60-69 years, male 139.8
GTEX-WWYW-3126-SM-3NB39 50-59 years, female 139.3
GTEX-145MF-2726-SM-5O995 50-59 years, male 139.1
GTEX-XLM4-3026-SM-4AT6L 60-69 years, male 138.8
GTEX-12ZZX-2926-SM-5GCOQ 40-49 years, female 138.5
GTEX-WVLH-3026-SM-3MJG9 50-59 years, male 136.8
GTEX-13VXU-2926-SM-5LU5C 50-59 years, male 136.4
GTEX-11OC5-0726-SM-5P9JK 60-69 years, male 134.9
GTEX-12126-1026-SM-5P9JJ 20-29 years, male 133.2
GTEX-QVJO-1426-SM-2S1QY 60-69 years, female 132.8
GTEX-11ZUS-2926-SM-5FQSL 30-39 years, male 132.2
GTEX-11WQK-3026-SM-5EQL6 50-59 years, male 130.7
GTEX-145MH-3026-SM-5Q5DZ 50-59 years, male 130.0
GTEX-11PRG-2926-SM-5987A 50-59 years, male 129.8
GTEX-WHSE-3026-SM-3P5ZH 20-29 years, male 129.8
GTEX-145MG-3026-SM-5RQJA 50-59 years, male 129.5
GTEX-13FHO-3026-SM-5J1O9 60-69 years, male 129.2
GTEX-13PL6-3126-SM-5LUAR 40-49 years, female 125.4
GTEX-YJ89-3026-SM-5IFJI 60-69 years, male 125.4
GTEX-YFC4-3126-SM-5PNV6 40-49 years, female 125.2
GTEX-13OW6-3026-SM-5J2MI 50-59 years, male 123.8
GTEX-ZVT3-3026-SM-5E43N 60-69 years, female 122.8
GTEX-Y8DK-0826-SM-4TT3T 60-69 years, male 121.2
GTEX-11GSO-2926-SM-5HL73 60-69 years, male 118.6
GTEX-12ZZY-3026-SM-5GCOU 60-69 years, male 115.2
GTEX-13FXS-3126-SM-5J2NN 50-59 years, male 114.4
GTEX-1399T-3026-SM-5KLZC 60-69 years, male 113.8
GTEX-13NYC-2826-SM-5K7WR 60-69 years, male 111.6
GTEX-13FLW-1426-SM-5K7YE 50-59 years, male 109.0
GTEX-13O3Q-2926-SM-5KM45 50-59 years, male 109.0
GTEX-RU72-3026-SM-5SI7Y 50-59 years, female 108.7
GTEX-ZUA1-3026-SM-59HJC 40-49 years, male 105.6
GTEX-Y111-2726-SM-4TT3N 50-59 years, male 105.5
GTEX-ZAK1-3026-SM-5S2MJ 50-59 years, female 105.5
GTEX-11DXW-1126-SM-5H12Q 40-49 years, male 105.2
GTEX-1192X-3126-SM-5N9BY 50-59 years, male 104.0
GTEX-12ZZZ-3026-SM-5BC67 60-69 years, male 103.7
GTEX-13S7M-3126-SM-5RQJQ 60-69 years, female 103.7
GTEX-PVOW-2526-SM-2XCF7 40-49 years, male 103.1
GTEX-14A5I-2926-SM-5Q5CQ 50-59 years, female 102.2
GTEX-12ZZW-2926-SM-5LZUP 50-59 years, male 102.0
GTEX-12WSH-3026-SM-5CVNI 50-59 years, male 100.5
GTEX-13QIC-2926-SM-5J2NF 60-69 years, female 100.1
GTEX-131YS-3126-SM-5KLYT 60-69 years, female 99.7
GTEX-RNOR-2326-SM-2TF4I 50-59 years, female 99.3
GTEX-11NUK-2926-SM-5A5MD 50-59 years, male 98.3
GTEX-R55F-1326-SM-5S2V4 50-59 years, male 97.4
GTEX-13NYB-3026-SM-5IJD7 40-49 years, male 95.6
GTEX-11GS4-3126-SM-5A5LH 60-69 years, male 94.0
GTEX-Q2AG-2926-SM-2HMJ3 40-49 years, female 90.1
GTEX-13FHP-3026-SM-5IJBS 50-59 years, male 90.0
GTEX-WZTO-2926-SM-3NM9I 40-49 years, male 90.0
GTEX-QVUS-2826-SM-3GADB 60-69 years, female 89.9
GTEX-111FC-3126-SM-5GZZ2 60-69 years, male 88.5
GTEX-UTHO-3026-SM-3GAFB 60-69 years, male 86.5
GTEX-144GL-3026-SM-5Q5CW 50-59 years, male 86.1
GTEX-13JVG-3126-SM-5L3FH 60-69 years, male 85.8
GTEX-11EMC-3226-SM-5EGKW 60-69 years, female 82.1
GTEX-NPJ8-1526-SM-2D7VU 40-49 years, male 80.3
GTEX-T2IS-3026-SM-32QPM 20-29 years, female 80.3
GTEX-11EI6-3026-SM-5GZZO 60-69 years, male 80.1
GTEX-ZAJG-3126-SM-5HL9J 50-59 years, female 79.0
GTEX-1117F-3226-SM-5N9CT 60-69 years, female 78.6
GTEX-QMR6-1426-SM-32PLA 50-59 years, male 77.0
GTEX-13PVQ-3026-SM-5SI93 50-59 years, male 74.9
GTEX-13X6J-3026-SM-5Q5CU 50-59 years, male 73.2
GTEX-13OW7-3026-SM-5L3GY 50-59 years, male 71.4
GTEX-OXRN-2426-SM-2I5EQ 50-59 years, male 69.6
GTEX-N7MT-1126-SM-5SI7V 60-69 years, female 69.1
GTEX-144FL-3026-SM-5O99C 50-59 years, male 68.6
GTEX-139T8-1026-SM-5J2MC 60-69 years, male 63.5
GTEX-13OVJ-2826-SM-5L3GW 50-59 years, female 61.2
GTEX-12WSD-3126-SM-5HL7P 60-69 years, female 57.1
GTEX-13IVO-2926-SM-5L3CZ 70-79 years, male 53.8
GTEX-11GSP-3226-SM-5986O 60-69 years, female 53.1
GTEX-QDT8-2926-SM-32PKC 30-39 years, female 52.2
GTEX-131XW-3126-SM-5LZUC 50-59 years, female 49.3
GTEX-11TTK-2926-SM-5PNYP 60-69 years, female 47.7
GTEX-ZE7O-3126-SM-5HL5X 50-59 years, female 47.7
GTEX-13JUV-2926-SM-5LZX7 40-49 years, female 45.0
GTEX-NPJ7-2726-SM-2I3FT 60-69 years, female 44.8
GTEX-12WSA-2926-SM-5EQ4D 60-69 years, male 40.6
GTEX-13X6K-2926-SM-5Q5D5 60-69 years, female 38.4
GTEX-PWO3-0926-SM-2I5EY 60-69 years, female 37.6
GTEX-13G51-3026-SM-5IJB8 60-69 years, male 36.1
GTEX-147GR-3026-SM-5S2ML 60-69 years, male 35.4
GTEX-11NV4-2126-SM-5N9DS 60-69 years, male 31.9
GTEX-1445S-3026-SM-5O9BR 60-69 years, male 31.8
GTEX-11OF3-2926-SM-5HL78 60-69 years, male 2.7
Show all
Brain - Frontal Cortex (BA9)
RPKM: 147.6
Samples: 108

Max RPKM: 364.3
Min RPKM: 22.2
Std RPKM: 76.9
Median RPKM: 147.1
GTEX-X585-0011-R10A-SM-46MUY 50-59 years, male 364.3
GTEX-X4XX-0011-R10B-SM-46MWO 60-69 years, male 336.0
GTEX-13NYS-0011-R10a-SM-5MR4S 60-69 years, male 327.0
GTEX-13RTJ-0011-R10b-SM-5O9CW 60-69 years, male 315.1
GTEX-13N1W-0011-R10b-SM-5MR4H 70-79 years, male 292.5
GTEX-13O3O-0011-R10a-SM-5LUA9 60-69 years, female 290.7
GTEX-13CZV-0011-R10b-SM-5LZYD 60-69 years, male 290.5
GTEX-13SLX-0011-R10a-SM-5P9HV 50-59 years, female 286.9
GTEX-13QJC-0011-R10a-SM-5SI63 60-69 years, female 276.0
GTEX-14ASI-0011-R10b-SM-5S2VZ 60-69 years, male 263.3
GTEX-132Q8-0011-R10b-SM-5DUWZ 60-69 years, male 255.9
GTEX-NL3H-0011-R10A-SM-2I3E9 60-69 years, male 246.6
GTEX-13OW7-0011-R10a-SM-5L3H3 50-59 years, male 244.4
GTEX-NPJ8-0011-R10A-SM-2YUMO 40-49 years, male 229.4
GTEX-QVJO-0011-R10A-SM-2S1QJ 60-69 years, female 223.8
GTEX-13S7M-0011-R10b-SM-5PNZB 60-69 years, female 223.2
GTEX-14BIN-0011-R10a-SM-5S2UA 50-59 years, female 222.6
GTEX-145MG-0011-R10a-SM-5PNWG 50-59 years, male 222.5
GTEX-12WSE-0011-R10b-SM-5P9JV 20-29 years, male 221.6
GTEX-T6MN-0011-R10A-SM-32QP7 50-59 years, male 217.8
GTEX-Y8DK-0011-R10A-SM-4SOK1 60-69 years, male 208.4
GTEX-145LS-0011-R10a-SM-5PNUQ 60-69 years, female 204.9
GTEX-11H98-0011-R10b-SM-5NQ98 50-59 years, male 203.7
GTEX-12WSC-0011-R10a-SM-5GU57 50-59 years, male 199.5
GTEX-13QIC-0011-R10a-SM-5O9C7 60-69 years, female 198.8
GTEX-12WSF-0011-R10a-SM-5LZVH 70-79 years, male 195.3
GTEX-ZF28-0011-R10a-SM-4WWEH 60-69 years, male 195.3
GTEX-145MH-0011-R10b-SM-5PNUK 50-59 years, male 192.8
GTEX-13X6I-0011-R10a-SM-5PNWI 60-69 years, male 188.9
GTEX-13O3Q-0011-R10b-SM-5KM39 50-59 years, male 186.1
GTEX-XLM4-0011-R10A-SM-4AT5P 60-69 years, male 184.4
GTEX-13FXS-0011-R10a-SM-5J2MA 50-59 years, male 180.3
GTEX-WL46-0011-R10A-SM-3MJFQ 50-59 years, male 179.8
GTEX-1313W-0011-R10b-SM-5DUXA 50-59 years, female 178.7
GTEX-13X6K-0011-R10a-SM-5P9JR 60-69 years, female 177.8
GTEX-Q2AG-0011-R10A-SM-2HMLA 40-49 years, female 176.3
GTEX-131XH-0011-R10a-SM-5EGLJ 50-59 years, male 173.9
GTEX-N7MT-0011-R10A-SM-2I3E1 60-69 years, female 173.8
GTEX-13X6J-0011-R10b-SM-5PNWA 50-59 years, male 171.3
GTEX-12ZZZ-0011-R10a-SM-5P9HC 60-69 years, male 168.3
GTEX-12WSH-0011-R10a-SM-5LZUS 50-59 years, male 167.3
GTEX-12ZZX-0011-R10b-SM-5DUWK 40-49 years, female 166.6
GTEX-WZTO-0011-R10B-SM-4E3KB 40-49 years, male 161.4
GTEX-S7SE-0011-R10A-SM-2XCDF 50-59 years, male 160.1
GTEX-N7MS-0011-R10A-SM-2HMJK 60-69 years, male 159.4
GTEX-13FLW-0011-R10b-SM-5LZZF 50-59 years, male 159.1
GTEX-WVLH-0011-R10A-SM-3MJFM 50-59 years, male 157.2
GTEX-131YS-0011-R10b-SM-5EQ5N 60-69 years, female 155.5
GTEX-13NYB-0011-R10a-SM-5KM43 40-49 years, male 154.6
GTEX-147GR-0011-R10b-SM-5S2UM 60-69 years, male 153.2
GTEX-ZAB4-0011-R10a-SM-4SOKH 40-49 years, male 153.2
GTEX-WWYW-0011-R10A-SM-3NB35 50-59 years, female 153.1
GTEX-145LU-0011-R10a-SM-5PNWJ 50-59 years, male 149.8
GTEX-T5JC-0011-R10A-SM-32PM2 20-29 years, male 147.6
GTEX-YFC4-0011-R10a-SM-4SOK5 40-49 years, female 146.5
GTEX-13FHO-0011-R10b-SM-5J2MM 60-69 years, male 141.4
GTEX-14BIL-0011-R10a-SM-5SI75 50-59 years, male 140.8
GTEX-13OW6-0011-R10a-SM-5L3HE 50-59 years, male 138.6
GTEX-ZVZQ-0011-R10b-SM-51MRT 60-69 years, female 138.5
GTEX-12WSM-0011-R10a-SM-5DUWV 60-69 years, male 135.7
GTEX-YJ89-0011-R10a-SM-4SOK9 60-69 years, male 135.2
GTEX-13G51-0011-R10b-SM-5LZYF 60-69 years, male 135.0
GTEX-13FLV-0011-R10b-SM-5LZZ2 50-59 years, male 128.9
GTEX-13FTZ-0011-R10b-SM-5KLZS 60-69 years, male 127.4
GTEX-TSE9-0011-R10A-SM-3DB7O 60-69 years, female 125.2
GTEX-13OVL-0011-R10a-SM-5L3GS 50-59 years, male 123.5
GTEX-12ZZY-0011-R10b-SM-5HL7W 60-69 years, male 121.7
GTEX-NPJ7-0011-R10A-SM-2I3E5 60-69 years, female 116.1
GTEX-147F4-0011-R10b-SM-5S2WC 50-59 years, male 115.8
GTEX-ZDXO-0011-R10a-SM-4WWD8 60-69 years, male 115.7
GTEX-RVPU-0011-R10A-SM-2XCAH 50-59 years, male 115.5
GTEX-13OW8-0011-R10a-SM-5L3H6 60-69 years, male 114.5
GTEX-13SLW-0011-R10a-SM-5S2UI 70-79 years, male 113.1
GTEX-QVUS-0011-R10A-SM-3GIK3 60-69 years, female 109.9
GTEX-X4EP-0011-R10B-SM-4QASJ 60-69 years, female 109.5
GTEX-X261-0011-R10B-SM-4E3JT 50-59 years, male 106.6
GTEX-11WQK-0011-R10a-SM-5BC6R 50-59 years, male 105.2
GTEX-QMR6-0011-R10A-SM-32PKO 50-59 years, male 97.5
GTEX-ZVT3-0011-R10b-SM-57WB6 60-69 years, female 96.1
GTEX-OXRN-0011-R10A-SM-2I5GC 50-59 years, male 86.8
GTEX-ZUA1-0011-R10a-SM-51MT6 40-49 years, male 82.3
GTEX-12126-0011-R10b-SM-5BC6T 20-29 years, male 79.4
GTEX-Z93S-0011-R10a-SM-4RGNM 50-59 years, male 79.3
GTEX-P44H-0011-R10A-SM-2XCEK 40-49 years, male 78.8
GTEX-13JUV-0011-R10b-SM-5LZXR 40-49 years, female 73.6
GTEX-11WQC-0011-R10a-SM-57WCT 60-69 years, male 72.6
GTEX-12ZZW-0011-R10b-SM-5HL9X 50-59 years, male 70.5
GTEX-12WSA-0011-R10b-SM-5P9ET 60-69 years, male 69.6
GTEX-ZXG5-0011-R10a-SM-57WDD 60-69 years, male 68.2
GTEX-QDT8-0011-R10A-SM-32PKG 30-39 years, female 68.0
GTEX-13IVO-0011-R10a-SM-5LZY3 70-79 years, male 63.8
GTEX-13NZA-0011-R10b-SM-5KM54 60-69 years, male 63.1
GTEX-14753-0011-R10b-SM-5S2WE 60-69 years, male 57.2
GTEX-12WSD-0011-R10b-SM-5GU79 60-69 years, female 53.7
GTEX-XMD1-0011-R10A-SM-4AT4A 60-69 years, male 50.1
GTEX-11GSP-0011-R10a-SM-5NQ7J 60-69 years, female 48.1
GTEX-13OVJ-0011-R10b-SM-5L3HT 50-59 years, female 47.4
GTEX-1477Z-0011-R10b-SM-5S2RF 60-69 years, male 47.3
GTEX-11ZUS-0011-R10b-SM-5BC79 30-39 years, male 47.0
GTEX-NL4W-0011-R10A-SM-2I3DY 50-59 years, male 45.4
GTEX-13N2G-0011-R10a-SM-5MR34 60-69 years, male 40.0
GTEX-OXRO-0011-R10A-SM-2I5EH 60-69 years, female 38.4
GTEX-131XW-0011-R10a-SM-5DUVA 50-59 years, female 35.8
GTEX-139TS-0011-R10a-SM-5K7TU 60-69 years, male 33.6
GTEX-13JVG-0011-R10b-SM-5KM2P 60-69 years, male 31.8
GTEX-ZV68-0011-R10a-SM-51MT7 50-59 years, female 23.3
GTEX-ZE7O-0011-R10a-SM-57WAZ 50-59 years, female 22.3
GTEX-1445S-0011-R10a-SM-5PNWB 60-69 years, male 22.2
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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