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ESOPHAGUS - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:96.4TPM
GTEx:65.5RPKM
FANTOM5:110.6Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:Medium
 

Antibody staining

Antibody HPA041225

  

Antibody HPA044675

  

Squamous epithelial cells

 Medium   Medium  
   

ESOPHAGUS - HPA RNA-seq

Average TPM

96.4
overview Female, age 70 Sample 1
TPM: 95.1
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38 Sample 2
TPM: 82
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76 Sample 3
TPM: 112
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

65.5

GTEx sample id

Sample description

RPKM
Esophagus - Mucosa
RPKM: 65.5
Samples: 286

Max RPKM: 148.2
Min RPKM: 31.7
Std RPKM: 20.2
Median RPKM: 61.0
GTEX-O5YV-1026-SM-3LK72 60-69 years, female 148.2
GTEX-R55G-1026-SM-48FDI 40-49 years, female 140.0
GTEX-VUSG-1226-SM-4KKZF 50-59 years, male 138.8
GTEX-Q2AH-0826-SM-48TZN 40-49 years, male 134.4
GTEX-OIZG-1026-SM-3LK5X 50-59 years, male 133.8
GTEX-12BJ1-1626-SM-5HL8Y 60-69 years, male 121.5
GTEX-R55E-1326-SM-48FCR 20-29 years, male 112.3
GTEX-1122O-1726-SM-5GICM 60-69 years, female 112.0
GTEX-XBEW-1326-SM-4AT63 40-49 years, male 110.7
GTEX-OXRN-1726-SM-3NM9B 50-59 years, male 109.2
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

110.6

FANTOM5 sample id

Sample description

Tags Per Million
Esophagus
Tags Per Million: 110.6
FF:10015-101C6 68,74,75 years, mixed 110.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.