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JADE3

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GENERAL INFORMATION

Gene name

 JADE3

Gene description

 Jade family PHD finger 3

Protein class

 Predicted intracellular proteins

Predicted localization

 Intracellular

Number of transcripts

 4
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HUMAN PROTEIN ATLAS INFORMATION

Summary

 Localized to the nucleus & nucleoli.

RNA cell category

 Cell line enhanced (BEWO)

Protein evidence

 Evidence at protein level

Main location

 Localized to the Nucleus (approved), Nucleoli (approved)

DATA RELIABILITY

Reliability score

 Approved based on 1 antibody.
HPA064697
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ASSAYS
RNA expression
Human cells

RNA EXPRESSION OVERVIEW
RNA cell line category: Cell line enhanced (BEWO)
Organ
Origin
Category
Expression
Alphabetical
Cell lines sorted after organ of phenotypic resemblance.

HUMAN CELLS

Summary

 Localized to the nucleus & nucleoli.

Main location

 Nucleus (approved), Nucleoli (approved)

 

 

 
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Low
High
G1
S
G2
M
N/A

Thumbnail

Antibody

Cell line

Location

Single-cell variation

Cell cycle dependent variation
HPA064697 RH-30 Nucleus
Nucleoli
HPA064697 SH-SY5Y Nucleus
Nucleoli
HPA064697 U-2 OS Nucleus
Nucleoli

GENE INFORMATION

Gene name

 JADE3 (HGNC Symbol)

Synonyms

 JADE-3, KIAA0215, PHF16

Description

 Jade family PHD finger 3 (HGNC Symbol)

Entrez gene summary

 This gene encodes a member of a family of large proteins containing PHD (plant homeo domain)-type zinc fingers. The encoded protein may be associated in a nuclear complex that functions in histone H4 acetylation. Alternative splicing results in multiple transcript variants encoding the same protein. [provided by RefSeq, Aug 2013]

Chromosome

 X

Cytoband

 p11.3

Chromosome location (bp)

 46912276 - 47061242

Protein evidence

 Evidence at protein level (all genes)

Ensembl

 ENSG00000102221 (version 83.38)

Entrez gene

 9767

UniProt

 Q92613 (UniProt - Evidence at protein level)

neXtProt

 NX_Q92613

Antibodypedia

 JADE3 antibodies

PROTEIN BROWSER
JADE3-001
JADE3-002
JADE3-003
JADE3-201

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)
JADE3-001
ENSP00000481850
ENST00000614628
Q92613 [Direct mapping]
Protein Jade-3
A0A024R1A2 [Target identity:100%; Query identity:100%]
PHD finger protein 16, isoform CRA_a
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Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000123 [histone acetyltransferase complex]
GO:0005515 [protein binding]
GO:0008270 [zinc ion binding]
GO:0043966 [histone H3 acetylation]
GO:0043981 [histone H4-K5 acetylation]
GO:0043982 [histone H4-K8 acetylation]
GO:0043983 [histone H4-K12 acetylation]
Show all
 823 aa
93.8 kDa 		No 0
JADE3-002
ENSP00000391009
ENST00000424392
F2Z3N8 [Direct mapping]
Protein Jade-3
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Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
 186 aa
21.4 kDa 		No 0
JADE3-003
ENSP00000400584
ENST00000455411
F2Z2B6 [Direct mapping]
Protein Jade-3
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
 114 aa
13.2 kDa 		No 0
JADE3-201
ENSP00000479377
ENST00000611250
Q92613 [Direct mapping]
Protein Jade-3
A0A024R1A2 [Target identity:100%; Query identity:100%]
PHD finger protein 16, isoform CRA_a
Show all
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000123 [histone acetyltransferase complex]
GO:0005515 [protein binding]
GO:0008270 [zinc ion binding]
GO:0043966 [histone H3 acetylation]
GO:0043981 [histone H4-K5 acetylation]
GO:0043982 [histone H4-K8 acetylation]
GO:0043983 [histone H4-K12 acetylation]
Show all
 823 aa
93.8 kDa 		No 0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.