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BEX4

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:28.0TPM
GTEx:33.3RPKM
FANTOM5:91.4Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA045105

  

Endothelial cells

 Medium  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 Low  
 
 
 

COLON - HPA RNA-seq

Average TPM

28.0
overview Male, age 54 Sample 1
TPM: 23
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 20.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 11.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 19.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 25.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 48.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 30.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 26.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 38.7
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 21.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 26.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 40.7
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 30.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

33.3

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 43.4
Samples: 149

Max RPKM: 70.2
Min RPKM: 18.4
Std RPKM: 8.5
Median RPKM: 42.6
GTEX-X4EO-2726-SM-4E3HS 60-69 years, female 70.2
GTEX-Y9LG-1326-SM-4VBQB 30-39 years, male 65.7
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 64.2
GTEX-ZYT6-2826-SM-5GICX 30-39 years, male 61.5
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 59.3
GTEX-12ZZY-2726-SM-5EQ45 60-69 years, male 59.0
GTEX-YJ8O-1426-SM-5PNV9 40-49 years, female 58.6
GTEX-12WSG-2426-SM-5EQLZ 50-59 years, female 58.4
GTEX-11P7K-1826-SM-5HL5A 30-39 years, male 58.1
GTEX-WHPG-1626-SM-4M1ZL 50-59 years, male 57.6
Show all
Colon - Transverse
RPKM: 25.6
Samples: 196

Max RPKM: 70.7
Min RPKM: 6.2
Std RPKM: 13.8
Median RPKM: 20.3
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 70.7
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 60.7
GTEX-13FHP-2426-SM-5KLZ5 50-59 years, male 58.6
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 57.9
GTEX-145LS-2726-SM-5Q5D8 60-69 years, female 57.8
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 57.0
GTEX-OXRL-1426-SM-3NM9E 50-59 years, male 56.0
GTEX-YEC4-1926-SM-5IFHJ 40-49 years, male 55.4
GTEX-ZYFC-2626-SM-5NQ6S 50-59 years, male 54.1
GTEX-111YS-1626-SM-5GZZ9 60-69 years, male 53.2
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

91.4

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 91.4
FF:10014-101C5 62,83,84 years, mixed 91.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.