Tissue expression of IGDCC4 - Staining in adipose tissue

SOFT TISSUE - Expression summary

Protein expression

RNA expression

HPA:	1.0	TPM
GTEx:	1.1	RPKM
FANTOM5:	0.6	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Low
Chondrocytes:	Medium
Fibroblasts:	Low
Peripheral nerve:	Low

Antibody staining	Antibody HPA008576
Adipocytes	Low
Chondrocytes	Medium
Fibroblasts	Low
Peripheral nerve	Low

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Low
Fibroblasts:	Low
Peripheral nerve:	Not detected

Antibody staining	Antibody HPA008576
Adipocytes	Low
Fibroblasts	Low
Peripheral nerve	Not detected

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	1.0

Female, age 80

Sample 1
TPM: 0.8

Cell types%

Adipocytes: 95
Other cell types: 5

Female, age 45

Sample 2
TPM: 0.4

Female, age 57

Sample 3
TPM: 0.1

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

Female, age 74

Sample 4
TPM: 1.4

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

Female, age 59

Sample 5
TPM: 2.3

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	1.1

GTEx sample id

Sample description

RPKM

Adipose - Subcutaneous
RPKM: 1.1

Samples: 350

Max RPKM: 8.2
Min RPKM: 0.0
Std RPKM: 1.2
Median RPKM: 0.7

GTEX-13PLJ-0126-SM-5L3HU

60-69 years, female

8.2

GTEX-WVJS-0226-SM-4MVOU

50-59 years, male

8.2

GTEX-Y8E5-0226-SM-57WCM

60-69 years, male

7.8

GTEX-113IC-0226-SM-5HL5C

60-69 years, male

6.4

GTEX-1212Z-2426-SM-5EQ5D

60-69 years, male

6.0

GTEX-T6MN-0226-SM-32PMD

50-59 years, male

5.4

GTEX-144GL-0226-SM-5QGOX

50-59 years, male

5.2

GTEX-SSA3-0226-SM-32QPN

60-69 years, male

5.0

GTEX-13CF2-2626-SM-5LZZA

60-69 years, male

4.8

GTEX-YJ89-0226-SM-4TT3Y

60-69 years, male

4.4

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Adipose - Visceral (Omentum)
RPKM: 1.0

Samples: 227

Max RPKM: 6.8
Min RPKM: 0.0
Std RPKM: 1.0
Median RPKM: 0.6

GTEX-UPK5-1826-SM-3GAEB

40-49 years, male

6.8

GTEX-ZDXO-2326-SM-5LU9W

60-69 years, male

4.7

GTEX-YECK-1426-SM-5IFHE

60-69 years, male

4.4

GTEX-ZC5H-1626-SM-5HL7L

40-49 years, female

4.2

GTEX-ZZPU-0326-SM-5N9BJ

50-59 years, female

4.0

GTEX-13FHO-2026-SM-5J1OA

60-69 years, male

3.7

GTEX-WK11-2426-SM-3NMAA

50-59 years, male

3.5

GTEX-13N11-1826-SM-5IJDS

50-59 years, female

3.4

GTEX-11DXZ-1426-SM-5H12A

50-59 years, male

3.2

GTEX-11DXY-0326-SM-5H12F

60-69 years, male

3.1

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	0.6

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 0.6

FF:10010-101C1

65,65,76 years, mixed

0.6