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SLC17A7
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    TISSUE

  • CELL

  • PATHOLOGY

TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:586.2TPM
GTEx:272.7RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Not detected
Neuronal cells:Not detected
Neuropil:High
 

Antibody staining

Antibody HPA050458

 

Antibody HPA063679

 

Antibody CAB037183

 

Endothelial cells

Not detected   Not detected   Not detected  

Glial cells

Not detected   Not detected   Not detected  

Neuronal cells

Not detected   Not detected   Not detected  

Neuropil

High   Medium   High  
     
     
     

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

586.2

N/A Male, age 5 Sample 1
TPM: 808.3
overview Female, age 40 Sample 2
TPM: 155.6
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70 Sample 3
TPM: 794.5
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

272.7

GTEx sample id

Sample description

RPKM

Brain - Cortex
RPKM: 275.1
Samples: 114

Max RPKM: 525.2
Min RPKM: 68.7
Std RPKM: 99.8
Median RPKM: 278.7
GTEX-Z93S-2926-SM-57WB9 50-59 years, male 525.2
GTEX-WL46-2926-SM-3LK82 50-59 years, male 504.1
GTEX-WHSE-3026-SM-3P5ZH 20-29 years, male 486.5
GTEX-T5JC-2426-SM-3NMDB 20-29 years, male 479.2
GTEX-WVLH-3026-SM-3MJG9 50-59 years, male 456.8
GTEX-12ZZX-2926-SM-5GCOQ 40-49 years, female 445.0
GTEX-13SLX-3126-SM-5S2Q5 50-59 years, female 440.1
GTEX-T6MN-2626-SM-32PMQ 50-59 years, male 435.4
GTEX-PVOW-2526-SM-2XCF7 40-49 years, male 429.5
GTEX-1313W-3126-SM-5LZUI 50-59 years, female 412.6
GTEX-13VXU-2926-SM-5LU5C 50-59 years, male 406.4
GTEX-12126-1026-SM-5P9JJ 20-29 years, male 401.0
GTEX-T2IS-3026-SM-32QPM 20-29 years, female 400.9
GTEX-13FLW-1426-SM-5K7YE 50-59 years, male 390.8
GTEX-RNOR-2326-SM-2TF4I 50-59 years, female 380.6
GTEX-TSE9-3026-SM-3DB76 60-69 years, female 375.4
GTEX-WZTO-2926-SM-3NM9I 40-49 years, male 375.0
GTEX-11ZUS-2926-SM-5FQSL 30-39 years, male 372.9
GTEX-WWYW-3126-SM-3NB39 50-59 years, female 368.9
GTEX-ZYFD-3026-SM-5E44C 50-59 years, male 368.1
GTEX-YFC4-3126-SM-5PNV6 40-49 years, female 361.9
GTEX-13OW6-3026-SM-5J2MI 50-59 years, male 360.9
GTEX-14BMV-3026-SM-5S2PQ 50-59 years, male 360.4
GTEX-145MH-3026-SM-5Q5DZ 50-59 years, male 358.7
GTEX-14ASI-3026-SM-5S2PN 60-69 years, male 349.9
GTEX-145LS-3126-SM-5Q5BY 60-69 years, female 348.8
GTEX-131YS-3126-SM-5KLYT 60-69 years, female 348.5
GTEX-ZUA1-3026-SM-59HJC 40-49 years, male 346.8
GTEX-11DXW-1126-SM-5H12Q 40-49 years, male 345.1
GTEX-QVJO-1426-SM-2S1QY 60-69 years, female 340.0
GTEX-13FXS-3126-SM-5J2NN 50-59 years, male 339.7
GTEX-13O3O-3126-SM-5KM3H 60-69 years, female 335.9
GTEX-11DXY-3226-SM-5GIDE 60-69 years, male 335.7
GTEX-YJ89-3026-SM-5IFJI 60-69 years, male 335.7
GTEX-13NYC-2826-SM-5K7WR 60-69 years, male 335.2
GTEX-XOTO-3026-SM-4B65M 50-59 years, male 322.7
GTEX-UTHO-3026-SM-3GAFB 60-69 years, male 317.7
GTEX-13NYB-3026-SM-5IJD7 40-49 years, male 315.9
GTEX-13O3Q-2926-SM-5KM45 50-59 years, male 313.8
GTEX-Q2AG-2926-SM-2HMJ3 40-49 years, female 311.2
GTEX-X4XX-3026-SM-3NMB2 60-69 years, male 311.0
GTEX-11PRG-2926-SM-5987A 50-59 years, male 310.7
GTEX-XLM4-3026-SM-4AT6L 60-69 years, male 310.6
GTEX-12WSC-3026-SM-5GCNF 50-59 years, male 308.7
GTEX-117XS-3026-SM-5N9CA 60-69 years, male 308.5
GTEX-Y111-2726-SM-4TT3N 50-59 years, male 308.4
GTEX-X585-3026-SM-46MWF 50-59 years, male 307.8
GTEX-144GL-3026-SM-5Q5CW 50-59 years, male 302.6
GTEX-145MF-2726-SM-5O995 50-59 years, male 300.5
GTEX-11NUK-2926-SM-5A5MD 50-59 years, male 299.0
GTEX-13OVH-3026-SM-5MR4N 70-79 years, male 297.2
GTEX-13PL6-3126-SM-5LUAR 40-49 years, female 295.3
GTEX-13FHO-3026-SM-5J1O9 60-69 years, male 290.4
GTEX-ZAK1-3026-SM-5S2MJ 50-59 years, female 289.5
GTEX-Y8DK-0826-SM-4TT3T 60-69 years, male 288.8
GTEX-R55F-1326-SM-5S2V4 50-59 years, male 282.9
GTEX-13OW8-2826-SM-5L3GC 60-69 years, male 280.0
GTEX-145MG-3026-SM-5RQJA 50-59 years, male 277.4
GTEX-ZVT3-3026-SM-5E43N 60-69 years, female 273.4
GTEX-111FC-3126-SM-5GZZ2 60-69 years, male 269.1
GTEX-QMR6-1426-SM-32PLA 50-59 years, male 268.2
GTEX-11ONC-2926-SM-5P9JM 60-69 years, male 265.1
GTEX-12ZZY-3026-SM-5GCOU 60-69 years, male 258.1
GTEX-1399T-3026-SM-5KLZC 60-69 years, male 256.5
GTEX-11GS4-3126-SM-5A5LH 60-69 years, male 246.4
GTEX-13X6J-3026-SM-5Q5CU 50-59 years, male 244.3
GTEX-1128S-2726-SM-5H12C 60-69 years, female 242.2
GTEX-12WSH-3026-SM-5CVNI 50-59 years, male 240.1
GTEX-11NV4-2126-SM-5N9DS 60-69 years, male 239.8
GTEX-13FHP-3026-SM-5IJBS 50-59 years, male 238.2
GTEX-NPJ7-2726-SM-2I3FT 60-69 years, female 237.1
GTEX-13NYS-3126-SM-5KLYV 60-69 years, male 236.0
GTEX-13QIC-2926-SM-5J2NF 60-69 years, female 235.0
GTEX-12ZZZ-3026-SM-5BC67 60-69 years, male 234.7
GTEX-QDT8-2926-SM-32PKC 30-39 years, female 234.1
GTEX-13JUV-2926-SM-5LZX7 40-49 years, female 234.0
GTEX-131XW-3126-SM-5LZUC 50-59 years, female 233.3
GTEX-11OC5-0726-SM-5P9JK 60-69 years, male 233.1
GTEX-OXRN-2426-SM-2I5EQ 50-59 years, male 231.8
GTEX-132Q8-3026-SM-5PNVG 60-69 years, male 231.6
GTEX-RU72-3026-SM-5SI7Y 50-59 years, female 229.3
GTEX-1192X-3126-SM-5N9BY 50-59 years, male 219.8
GTEX-11GSO-2926-SM-5HL73 60-69 years, male 215.4
GTEX-NPJ8-1526-SM-2D7VU 40-49 years, male 211.1
GTEX-11EI6-3026-SM-5GZZO 60-69 years, male 210.8
GTEX-QVUS-2826-SM-3GADB 60-69 years, female 209.0
GTEX-ZAJG-3126-SM-5HL9J 50-59 years, female 207.5
GTEX-14A5I-2926-SM-5Q5CQ 50-59 years, female 201.1
GTEX-13S7M-3126-SM-5RQJQ 60-69 years, female 199.0
GTEX-11OF3-2926-SM-5HL78 60-69 years, male 193.8
GTEX-12ZZW-2926-SM-5LZUP 50-59 years, male 193.1
GTEX-ZE7O-3126-SM-5HL5X 50-59 years, female 189.5
GTEX-1117F-3226-SM-5N9CT 60-69 years, female 186.4
GTEX-11EMC-3226-SM-5EGKW 60-69 years, female 179.3
GTEX-13JVG-3126-SM-5L3FH 60-69 years, male 169.9
GTEX-11WQK-3026-SM-5EQL6 50-59 years, male 168.9
GTEX-13OW7-3026-SM-5L3GY 50-59 years, male 158.0
GTEX-147GR-3026-SM-5S2ML 60-69 years, male 154.3
GTEX-11O72-2926-SM-5BC4V 40-49 years, male 145.6
GTEX-13PVQ-3026-SM-5SI93 50-59 years, male 145.1
GTEX-13X6K-2926-SM-5Q5D5 60-69 years, female 144.9
GTEX-12WSD-3126-SM-5HL7P 60-69 years, female 142.4
GTEX-N7MT-1126-SM-5SI7V 60-69 years, female 137.6
GTEX-ZZPT-3026-SM-5GZXH 50-59 years, male 137.4
GTEX-144FL-3026-SM-5O99C 50-59 years, male 129.9
GTEX-139T8-1026-SM-5J2MC 60-69 years, male 124.4
GTEX-13OVJ-2826-SM-5L3GW 50-59 years, female 116.0
GTEX-13IVO-2926-SM-5L3CZ 70-79 years, male 109.1
GTEX-13G51-3026-SM-5IJB8 60-69 years, male 106.9
GTEX-11TTK-2926-SM-5PNYP 60-69 years, female 104.2
GTEX-11GSP-3226-SM-5986O 60-69 years, female 101.4
GTEX-PWO3-0926-SM-2I5EY 60-69 years, female 92.9
GTEX-1445S-3026-SM-5O9BR 60-69 years, male 71.9
GTEX-12WSA-2926-SM-5EQ4D 60-69 years, male 68.7
Show all
Brain - Frontal Cortex (BA9)
RPKM: 270.1
Samples: 108

Max RPKM: 526.5
Min RPKM: 45.3
Std RPKM: 111.8
Median RPKM: 284.0
GTEX-12WSE-0011-R10b-SM-5P9JV 20-29 years, male 526.5
GTEX-Z93S-0011-R10a-SM-4RGNM 50-59 years, male 476.2
GTEX-131XH-0011-R10a-SM-5EGLJ 50-59 years, male 472.2
GTEX-1313W-0011-R10b-SM-5DUXA 50-59 years, female 436.7
GTEX-12ZZX-0011-R10b-SM-5DUWK 40-49 years, female 435.6
GTEX-13SLX-0011-R10a-SM-5P9HV 50-59 years, female 435.4
GTEX-T5JC-0011-R10A-SM-32PM2 20-29 years, male 433.6
GTEX-WVLH-0011-R10A-SM-3MJFM 50-59 years, male 429.0
GTEX-WZTO-0011-R10B-SM-4E3KB 40-49 years, male 425.8
GTEX-WL46-0011-R10A-SM-3MJFQ 50-59 years, male 419.8
GTEX-T6MN-0011-R10A-SM-32QP7 50-59 years, male 396.5
GTEX-13N1W-0011-R10b-SM-5MR4H 70-79 years, male 395.9
GTEX-ZVZQ-0011-R10b-SM-51MRT 60-69 years, female 395.8
GTEX-YFC4-0011-R10a-SM-4SOK5 40-49 years, female 388.5
GTEX-145MH-0011-R10b-SM-5PNUK 50-59 years, male 385.3
GTEX-Q2AG-0011-R10A-SM-2HMLA 40-49 years, female 382.7
GTEX-13RTJ-0011-R10b-SM-5O9CW 60-69 years, male 382.4
GTEX-14BIN-0011-R10a-SM-5S2UA 50-59 years, female 381.2
GTEX-12WSC-0011-R10a-SM-5GU57 50-59 years, male 379.2
GTEX-NL3H-0011-R10A-SM-2I3E9 60-69 years, male 377.6
GTEX-13OW7-0011-R10a-SM-5L3H3 50-59 years, male 377.3
GTEX-13X6K-0011-R10a-SM-5P9JR 60-69 years, female 374.2
GTEX-N7MS-0011-R10A-SM-2HMJK 60-69 years, male 371.8
GTEX-13O3O-0011-R10a-SM-5LUA9 60-69 years, female 368.6
GTEX-S7SE-0011-R10A-SM-2XCDF 50-59 years, male 359.6
GTEX-145MG-0011-R10a-SM-5PNWG 50-59 years, male 356.5
GTEX-14ASI-0011-R10b-SM-5S2VZ 60-69 years, male 356.0
GTEX-X585-0011-R10A-SM-46MUY 50-59 years, male 352.2
GTEX-QVJO-0011-R10A-SM-2S1QJ 60-69 years, female 351.6
GTEX-13OVL-0011-R10a-SM-5L3GS 50-59 years, male 343.8
GTEX-13O3Q-0011-R10b-SM-5KM39 50-59 years, male 342.9
GTEX-YJ89-0011-R10a-SM-4SOK9 60-69 years, male 336.9
GTEX-13S7M-0011-R10b-SM-5PNZB 60-69 years, female 335.4
GTEX-13QIC-0011-R10a-SM-5O9C7 60-69 years, female 334.8
GTEX-13QJC-0011-R10a-SM-5SI63 60-69 years, female 334.5
GTEX-WWYW-0011-R10A-SM-3NB35 50-59 years, female 326.9
GTEX-13OW6-0011-R10a-SM-5L3HE 50-59 years, male 326.7
GTEX-13FXS-0011-R10a-SM-5J2MA 50-59 years, male 325.3
GTEX-NPJ7-0011-R10A-SM-2I3E5 60-69 years, female 324.4
GTEX-12ZZZ-0011-R10a-SM-5P9HC 60-69 years, male 323.3
GTEX-Y8DK-0011-R10A-SM-4SOK1 60-69 years, male 322.5
GTEX-12WSF-0011-R10a-SM-5LZVH 70-79 years, male 321.0
GTEX-13X6J-0011-R10b-SM-5PNWA 50-59 years, male 318.6
GTEX-13FHO-0011-R10b-SM-5J2MM 60-69 years, male 312.2
GTEX-145LS-0011-R10a-SM-5PNUQ 60-69 years, female 308.9
GTEX-12WSM-0011-R10a-SM-5DUWV 60-69 years, male 305.8
GTEX-X4XX-0011-R10B-SM-46MWO 60-69 years, male 303.7
GTEX-131YS-0011-R10b-SM-5EQ5N 60-69 years, female 300.3
GTEX-QVUS-0011-R10A-SM-3GIK3 60-69 years, female 292.5
GTEX-13CZV-0011-R10b-SM-5LZYD 60-69 years, male 291.0
GTEX-13FLW-0011-R10b-SM-5LZZF 50-59 years, male 288.8
GTEX-NPJ8-0011-R10A-SM-2YUMO 40-49 years, male 286.3
GTEX-13NYS-0011-R10a-SM-5MR4S 60-69 years, male 285.4
GTEX-12126-0011-R10b-SM-5BC6T 20-29 years, male 284.6
GTEX-N7MT-0011-R10A-SM-2I3E1 60-69 years, female 283.5
GTEX-12WSH-0011-R10a-SM-5LZUS 50-59 years, male 282.3
GTEX-13NYB-0011-R10a-SM-5KM43 40-49 years, male 281.1
GTEX-12ZZY-0011-R10b-SM-5HL7W 60-69 years, male 278.5
GTEX-147GR-0011-R10b-SM-5S2UM 60-69 years, male 277.0
GTEX-XLM4-0011-R10A-SM-4AT5P 60-69 years, male 275.5
GTEX-13X6I-0011-R10a-SM-5PNWI 60-69 years, male 266.0
GTEX-TSE9-0011-R10A-SM-3DB7O 60-69 years, female 265.5
GTEX-132Q8-0011-R10b-SM-5DUWZ 60-69 years, male 261.1
GTEX-ZF28-0011-R10a-SM-4WWEH 60-69 years, male 259.9
GTEX-13G51-0011-R10b-SM-5LZYF 60-69 years, male 257.7
GTEX-11H98-0011-R10b-SM-5NQ98 50-59 years, male 257.0
GTEX-ZVT3-0011-R10b-SM-57WB6 60-69 years, female 257.0
GTEX-QDT8-0011-R10A-SM-32PKG 30-39 years, female 251.2
GTEX-13FLV-0011-R10b-SM-5LZZ2 50-59 years, male 251.1
GTEX-147F4-0011-R10b-SM-5S2WC 50-59 years, male 249.2
GTEX-13JUV-0011-R10b-SM-5LZXR 40-49 years, female 238.4
GTEX-14BIL-0011-R10a-SM-5SI75 50-59 years, male 227.2
GTEX-ZAB4-0011-R10a-SM-4SOKH 40-49 years, male 224.7
GTEX-QMR6-0011-R10A-SM-32PKO 50-59 years, male 218.4
GTEX-OXRN-0011-R10A-SM-2I5GC 50-59 years, male 217.6
GTEX-13OW8-0011-R10a-SM-5L3H6 60-69 years, male 215.5
GTEX-ZDXO-0011-R10a-SM-4WWD8 60-69 years, male 213.9
GTEX-P44H-0011-R10A-SM-2XCEK 40-49 years, male 208.7
GTEX-NL4W-0011-R10A-SM-2I3DY 50-59 years, male 205.4
GTEX-RVPU-0011-R10A-SM-2XCAH 50-59 years, male 201.4
GTEX-ZUA1-0011-R10a-SM-51MT6 40-49 years, male 185.2
GTEX-145LU-0011-R10a-SM-5PNWJ 50-59 years, male 184.6
GTEX-ZXG5-0011-R10a-SM-57WDD 60-69 years, male 182.5
GTEX-13FTZ-0011-R10b-SM-5KLZS 60-69 years, male 174.1
GTEX-11ZUS-0011-R10b-SM-5BC79 30-39 years, male 167.3
GTEX-13SLW-0011-R10a-SM-5S2UI 70-79 years, male 166.7
GTEX-X261-0011-R10B-SM-4E3JT 50-59 years, male 158.0
GTEX-11WQC-0011-R10a-SM-57WCT 60-69 years, male 155.6
GTEX-139TS-0011-R10a-SM-5K7TU 60-69 years, male 145.9
GTEX-11WQK-0011-R10a-SM-5BC6R 50-59 years, male 145.1
GTEX-13NZA-0011-R10b-SM-5KM54 60-69 years, male 134.0
GTEX-X4EP-0011-R10B-SM-4QASJ 60-69 years, female 117.4
GTEX-13N2G-0011-R10a-SM-5MR34 60-69 years, male 115.0
GTEX-12ZZW-0011-R10b-SM-5HL9X 50-59 years, male 114.8
GTEX-OXRO-0011-R10A-SM-2I5EH 60-69 years, female 114.7
GTEX-12WSD-0011-R10b-SM-5GU79 60-69 years, female 96.2
GTEX-13IVO-0011-R10a-SM-5LZY3 70-79 years, male 93.2
GTEX-11GSP-0011-R10a-SM-5NQ7J 60-69 years, female 93.1
GTEX-14753-0011-R10b-SM-5S2WE 60-69 years, male 87.1
GTEX-ZE7O-0011-R10a-SM-57WAZ 50-59 years, female 85.1
GTEX-131XW-0011-R10a-SM-5DUVA 50-59 years, female 79.9
GTEX-13JVG-0011-R10b-SM-5KM2P 60-69 years, male 73.9
GTEX-1477Z-0011-R10b-SM-5S2RF 60-69 years, male 72.6
GTEX-12WSA-0011-R10b-SM-5P9ET 60-69 years, male 72.3
GTEX-13OVJ-0011-R10b-SM-5L3HT 50-59 years, female 68.7
GTEX-XMD1-0011-R10A-SM-4AT4A 60-69 years, male 64.3
GTEX-ZV68-0011-R10a-SM-51MT7 50-59 years, female 55.3
GTEX-1445S-0011-R10a-SM-5PNWB 60-69 years, male 45.3
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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