Fields »
ABOUT
HELP
BLOG
MET

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:11.4TPM
GTEx:6.6RPKM
FANTOM5:38.3Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Medium
Fibroblasts:Not detected
Peripheral nerve:High
 
 
 

Antibody staining

Antibody CAB005282

  

Antibody CAB018577

  

Adipocytes

 Not detected   High  

Chondrocytes

 Medium  

Fibroblasts

 Not detected   High  

Peripheral nerve

 High  
      
      
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Low
Peripheral nerve:Medium
 
 

Antibody staining

Antibody CAB005282

  

Antibody CAB018577

  

Adipocytes

 Low   High  

Fibroblasts

 Low   Medium  

Peripheral nerve

 Medium   High  
      
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

11.4
N/A Female, age 80 Sample 1
TPM: 11.2
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 13.9
N/A Female, age 57 Sample 3
TPM: 12.8
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 10.4
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 8.7
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

6.6

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 6.2
Samples: 350

Max RPKM: 20.7
Min RPKM: 1.6
Std RPKM: 2.6
Median RPKM: 5.8
GTEX-11P7K-2026-SM-5GU74 30-39 years, male 20.7
GTEX-117YX-2226-SM-5EGJJ 50-59 years, male 17.6
GTEX-O5YV-0226-SM-48TBY 60-69 years, female 16.5
GTEX-ZXES-2026-SM-5NQ6R 30-39 years, female 15.6
GTEX-12WSB-0226-SM-5GCOR 60-69 years, female 14.4
GTEX-ZZ64-1626-SM-5E43W 20-29 years, male 14.2
GTEX-13NZB-2426-SM-5K7UF 30-39 years, male 13.7
GTEX-13NZ8-0926-SM-5MR3U 60-69 years, female 13.6
GTEX-13O61-2426-SM-5J1NV 60-69 years, male 12.3
GTEX-14DAR-1926-SM-5S2NQ 50-59 years, male 11.7
Show all
Adipose - Visceral (Omentum)
RPKM: 7.3
Samples: 227

Max RPKM: 22.0
Min RPKM: 1.6
Std RPKM: 3.9
Median RPKM: 6.4
GTEX-13JUV-0626-SM-5J1MQ 40-49 years, female 22.0
GTEX-XOT4-0826-SM-4B66Y 60-69 years, female 22.0
GTEX-11NV4-1426-SM-5BC4W 60-69 years, male 20.6
GTEX-WYVS-0626-SM-4SOJY 40-49 years, female 20.0
GTEX-139TU-1426-SM-5LZY9 60-69 years, male 19.2
GTEX-13W46-1226-SM-5SIAS 50-59 years, male 18.1
GTEX-13N1W-1226-SM-5K7UM 70-79 years, male 17.9
GTEX-11DYG-2026-SM-5EGGX 60-69 years, male 16.5
GTEX-WHWD-0826-SM-3LK6R 50-59 years, male 15.9
GTEX-147JS-1026-SM-5S2MP 60-69 years, male 15.8
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

38.3

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 38.3
FF:10010-101C1 65,65,76 years, mixed 38.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.