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AIMP2

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:21.4TPM
GTEx:7.9RPKM
FANTOM5:44.8Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA019098

  

Antibody HPA020057

  

Endothelial cells

 Low   Not detected  

Glandular cells

 Medium   High  

Peripheral nerve/ganglion

 Medium   Medium  
   
   
   

COLON - HPA RNA-seq

Average TPM

21.4
overview Male, age 54 Sample 1
TPM: 19.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 19.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 26.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 27.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 18
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 22.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 24.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 21.4
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 17.5
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 24.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 18.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 24.7
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 13.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

7.9

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 6.0
Samples: 149

Max RPKM: 16.6
Min RPKM: 1.5
Std RPKM: 2.3
Median RPKM: 6.2
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 16.6
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 13.0
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 11.1
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 10.5
GTEX-14E6E-1726-SM-5S2R6 30-39 years, male 10.3
GTEX-13FH7-1626-SM-5J2O9 50-59 years, female 10.2
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 10.1
GTEX-12WSL-1826-SM-5LZW9 50-59 years, male 9.9
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 9.8
GTEX-11EM3-1626-SM-5N9CO 20-29 years, female 9.6
Show all
Colon - Transverse
RPKM: 9.4
Samples: 196

Max RPKM: 20.5
Min RPKM: 3.0
Std RPKM: 3.2
Median RPKM: 9.2
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 20.5
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 19.2
GTEX-QMRM-1226-SM-447C6 50-59 years, male 17.0
GTEX-Q2AI-0926-SM-48U1F 40-49 years, male 16.1
GTEX-U4B1-1126-SM-4DXV3 40-49 years, male 16.0
GTEX-T5JW-1126-SM-4DM5V 20-29 years, female 15.8
GTEX-ZF2S-1926-SM-4WWAN 50-59 years, female 15.5
GTEX-XMK1-1726-SM-4B64Z 40-49 years, male 15.4
GTEX-YF7O-1726-SM-5IFJ9 50-59 years, male 15.2
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 15.1
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

44.8

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 44.8
FF:10014-101C5 62,83,84 years, mixed 44.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.