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AGFG2

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:13.7TPM
GTEx:9.8RPKM
FANTOM5:30.1Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Glandular cells:Not detected
 

Antibody staining

Antibody HPA019689

  

Glandular cells

 Not detected  
 

COLON - HPA RNA-seq

Average TPM

13.7
overview Male, age 54 Sample 1
TPM: 14.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 11.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 12.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 22.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 10.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 14.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 12.1
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 10.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 18.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 14.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 17.8
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 13.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

9.8

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 5.5
Samples: 149

Max RPKM: 14.0
Min RPKM: 1.7
Std RPKM: 2.3
Median RPKM: 4.9
GTEX-WFG7-1626-SM-4LVMF 20-29 years, male 14.0
GTEX-1211K-1826-SM-5EGJ2 60-69 years, female 12.6
GTEX-XBED-1726-SM-47JYO 60-69 years, male 12.3
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 11.5
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 10.5
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 10.1
GTEX-WFG8-1726-SM-4LVM6 20-29 years, male 10.0
GTEX-Y9LG-1326-SM-4VBQB 30-39 years, male 10.0
GTEX-XUJ4-2126-SM-4BOOX 60-69 years, female 9.8
GTEX-ZVT2-1726-SM-51MRO 50-59 years, female 9.8
Show all
Colon - Transverse
RPKM: 13.0
Samples: 196

Max RPKM: 27.3
Min RPKM: 2.0
Std RPKM: 6.5
Median RPKM: 12.9
GTEX-11DXZ-1726-SM-5H12M 50-59 years, male 27.3
GTEX-U3ZN-2126-SM-4DXU1 30-39 years, female 27.2
GTEX-XPVG-1826-SM-4B64X 50-59 years, male 27.2
GTEX-13111-0726-SM-5DUVE 50-59 years, male 27.0
GTEX-TML8-1326-SM-4DXTO 40-49 years, female 26.8
GTEX-P4QT-1426-SM-3NMCX 50-59 years, female 26.6
GTEX-R55D-1826-SM-48FEF 50-59 years, male 26.4
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 26.0
GTEX-UJMC-1326-SM-4IHLS 50-59 years, male 24.1
GTEX-WHWD-1226-SM-4OOS1 50-59 years, male 23.3
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

30.1

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 30.1
FF:10014-101C5 62,83,84 years, mixed 30.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.