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GLCCI1

GENERAL INFORMATION

Gene name

 GLCCI1

Gene description

 Glucocorticoid induced 1

Protein class

 Predicted intracellular proteins
Predicted membrane proteins

Predicted localization

 Intracellular,Membrane

Number of transcripts

 3
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category
HPA:Mixed
GTEx:Expressed in all
FANTOM5:Expressed in all

Protein evidence

 Evidence at protein level

Protein expression

 General cytoplasmic expression.

DATA RELIABILITY

Data reliability
description

 Antibody staining mainly not consistent with RNA expression data.

Reliability score

 Approved based on 2 antibodies.
HPA001674 , HPA005987
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RNA AND PROTEIN EXPRESSION SUMMARY
RNA expression (TPM) Protein expression (score)
Brain
Caudate
N/A
Endocrine tissues
Bone marrow & immune system
Muscle tissues
Lung
Bronchus
N/A
Liver & gallbladder
Pancreas
Gastrointestinal tract
Kidney & urinary bladder
Male tissues
Female tissues
Vagina
N/A
Adipose & soft tissue
Skin
Cerebral cortex

Lymph node

Skeletal muscle

Liver

Colon

Kidney

Testis

PROTEIN EXPRESSION OVERVIEW
Organ
Expression
Alphabetical

RNA EXPRESSION OVERVIEW
HPA dataset
Organ
Expression
Alphabetical
RNA tissue category: Mixed
GTEx dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all
FANTOM5 dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all

GENE INFORMATION

Gene name

 GLCCI1 (HGNC Symbol)

Synonyms

 FAM117C, GIG18, TSSN1

Description

 Glucocorticoid induced 1 (HGNC Symbol)

Entrez gene summary

 This gene encodes a protein of unknown function. Expression of this gene is induced by glucocorticoids and may be an early marker for glucocorticoid-induced apoptosis. Single nucleotide polymorphisms in this gene are associated with a decreased response to inhaled glucocorticoids in asthmatic patients. [provided by RefSeq, Feb 2012]

Chromosome

 7

Cytoband

 p21.3

Chromosome location (bp)

 7968794 - 8094272

Protein evidence

 Evidence at protein level (all genes)

Ensembl

 ENSG00000106415 (version 83.38)

Entrez gene

 113263

UniProt

 Q86VQ1 (UniProt - Evidence at protein level)

neXtProt

 NX_Q86VQ1

Antibodypedia

 GLCCI1 antibodies

PROTEIN BROWSER
GLCCI1-001
GLCCI1-008
GLCCI1-009

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)
GLCCI1-001
ENSP00000223145
ENST00000223145
Q86VQ1 [Direct mapping]
Glucocorticoid-induced transcript 1 protein
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Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
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GO:0005737 [cytoplasm]
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 547 aa
58 kDa 		No 0
GLCCI1-008
ENSP00000406569
ENST00000414914
H7C2L5 [Direct mapping]
Glucocorticoid-induced transcript 1 protein
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Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
 192 aa
21.2 kDa 		No 0
GLCCI1-009
ENSP00000396171
ENST00000430798
H7C0Q2 [Direct mapping]
Glucocorticoid-induced transcript 1 protein
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Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
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GO:0016021 [integral component of membrane]
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 194 aa
21.7 kDa 		No 1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.