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GLCCI1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:4.5TPM
GTEx:3.0RPKM
FANTOM5:17.9Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA001674

  

Antibody HPA005987

  

Endothelial cells

 Low   Not detected  

Glandular cells

 High   Low  

Peripheral nerve/ganglion

 Not detected   Low  
   
   
   

COLON - HPA RNA-seq

Average TPM

4.5
overview Male, age 54 Sample 1
TPM: 6.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 4.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 4.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 1.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 4.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 3.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 3.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 4
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 6.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 5.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 4.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 5.1
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 3.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

3.0

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 2.5
Samples: 149

Max RPKM: 5.8
Min RPKM: 0.6
Std RPKM: 1.0
Median RPKM: 2.2
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 5.8
GTEX-11PRG-2026-SM-5GU5F 50-59 years, male 5.6
GTEX-1212Z-1826-SM-5FQSH 60-69 years, male 4.9
GTEX-YJ8O-1426-SM-5PNV9 40-49 years, female 4.8
GTEX-ZE7O-2626-SM-51MSS 50-59 years, female 4.8
GTEX-117XS-2226-SM-5GIE1 60-69 years, male 4.7
GTEX-145MH-2726-SM-5QGQ6 50-59 years, male 4.7
GTEX-132NY-2726-SM-5PNY2 60-69 years, male 4.6
GTEX-145MO-2626-SM-5QGPD 60-69 years, male 4.4
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 4.4
Show all
Colon - Transverse
RPKM: 3.4
Samples: 196

Max RPKM: 9.6
Min RPKM: 1.0
Std RPKM: 1.6
Median RPKM: 3.0
GTEX-ZVP2-1526-SM-5NQ82 50-59 years, male 9.6
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 9.1
GTEX-133LE-1526-SM-5IFEN 20-29 years, female 8.4
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 8.2
GTEX-WHWD-1226-SM-4OOS1 50-59 years, male 8.1
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 7.4
GTEX-VJYA-2026-SM-4KL1K 60-69 years, male 7.4
GTEX-13OW6-2126-SM-5N9GL 50-59 years, male 7.2
GTEX-P78B-1726-SM-3P5ZV 40-49 years, female 7.2
GTEX-12KS4-2426-SM-5LU8P 30-39 years, male 7.1
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

17.9

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 17.9
FF:10014-101C5 62,83,84 years, mixed 17.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.