Tissue expression of CNTNAP3 - Staining in colon

COLON - Expression summary

Protein expression

RNA expression

HPA:	1.1	TPM
GTEx:	0.7	RPKM

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:	Not detected
Glandular cells:	Medium
Peripheral nerve/ganglion:	Not detected

Antibody staining	Antibody HPA015604	Antibody HPA047731
Endothelial cells	Not detected	Not detected
Glandular cells	Medium	Medium
Peripheral nerve/ganglion	Low	Not detected

COLON - HPA RNA-seq

Average TPM	1.1

Male, age 54

Sample 1
TPM: 1.7

Cell types%

Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25

Female, age 57

Sample 2
TPM: 0.6

Cell types%

Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55

Male, age 80

Sample 3
TPM: 0.2

Cell types%

Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40

Male, age 68

Sample 4
TPM: 0.9

Cell types%

Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55

Female, age 68

Sample 5
TPM: 0.6

Cell types%

Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70

Female, age 61

Sample 6
TPM: 2.9

Cell types%

Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30

Male, age 80

Sample 7
TPM: 0.8

Cell types%

Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

Female, age 78

Sample 8
TPM: 0.4

Cell types%

Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50

Male, age 84

Sample 9
TPM: 3.7

Cell types%

Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35

Male, age 80

Sample 10
TPM: 0.3

Cell types%

Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45

Female, age 78

Sample 11
TPM: 0.8

Cell types%

Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55

Female, age 69

Sample 12
TPM: 1

Cell types%

Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45

Female, age 72

Sample 13
TPM: 0.4

Cell types%

Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM	0.7

GTEx sample id

Sample description

RPKM

Colon - Sigmoid
RPKM: 0.8

Samples: 149

Max RPKM: 3.8
Min RPKM: 0.0
Std RPKM: 0.6
Median RPKM: 0.7

GTEX-131XG-1526-SM-5GCNQ

50-59 years, female

3.8

GTEX-ZDTS-2726-SM-5L3E2

60-69 years, male

3.4

GTEX-12ZZW-2426-SM-5DUWE

50-59 years, male

3.2

GTEX-13FH7-1626-SM-5J2O9

50-59 years, female

2.8

GTEX-13OW6-2226-SM-5N9FL

50-59 years, male

2.3

GTEX-1211K-1826-SM-5EGJ2

60-69 years, female

2.1

GTEX-ZZ64-0826-SM-5E449

20-29 years, male

2.1

GTEX-Y114-1626-SM-4TT7I

50-59 years, female

2.0

GTEX-YEC3-2026-SM-4WWFL

50-59 years, male

2.0

GTEX-12WSG-2426-SM-5EQLZ

50-59 years, female

1.9

Show all

Colon - Transverse
RPKM: 0.5

Samples: 196

Max RPKM: 3.2
Min RPKM: 0.0
Std RPKM: 0.6
Median RPKM: 0.3

GTEX-XGQ4-1226-SM-4AT67

50-59 years, male

3.2

GTEX-TKQ1-0626-SM-4DXTS

30-39 years, male

2.7

GTEX-145LS-2726-SM-5Q5D8

60-69 years, female

2.4

GTEX-XXEK-1926-SM-4BRVD

50-59 years, male

2.4

GTEX-T6MO-0826-SM-4DM51

40-49 years, female

2.3

GTEX-ZAB4-2226-SM-5HL97

40-49 years, male

2.3

GTEX-111YS-1626-SM-5GZZ9

60-69 years, male

2.1

GTEX-WEY5-1426-SM-4LMJ3

40-49 years, female

2.1

GTEX-Y114-1526-SM-4TT79

50-59 years, female

2.0

GTEX-ZV6S-1226-SM-59HLH

40-49 years, female

2.0

Show all

COLON - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue