Tissue expression of CNTNAP3 - Staining in esophagus

ESOPHAGUS - Expression summary

Protein expression

RNA expression

HPA:	8.3	TPM
GTEx:	0.8	RPKM

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:

Not detected

Antibody staining	Antibody HPA015604	Antibody HPA047731
Squamous epithelial cells	Not detected	Not detected

ESOPHAGUS - HPA RNA-seq

Average TPM	8.3

Female, age 70

Sample 1
TPM: 3.2

Cell types%

Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45

Male, age 38

Sample 2
TPM: 14.9

Cell types%

Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20

Male, age 76

Sample 3
TPM: 6.9

Cell types%

Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM	0.8

GTEx sample id

Sample description

RPKM

Esophagus - Mucosa
RPKM: 0.8

Samples: 286

Max RPKM: 2.5
Min RPKM: 0.1
Std RPKM: 0.3
Median RPKM: 0.8

GTEX-13QBU-1026-SM-5LU3R

40-49 years, female

2.5

GTEX-WEY5-0926-SM-4LMI4

40-49 years, female

2.5

GTEX-11VI4-0526-SM-5EQ48

40-49 years, female

2.3

GTEX-13PVQ-1726-SM-5IFF3

50-59 years, male

2.2

GTEX-1399U-1026-SM-5J1OC

50-59 years, female

1.9

GTEX-P78B-1026-SM-3NMC4

40-49 years, female

1.7

GTEX-Y111-1626-SM-57WCY

50-59 years, male

1.7

GTEX-13O21-0626-SM-5IJDI

50-59 years, male

1.6

GTEX-OIZI-1426-SM-3NB1T

40-49 years, male

1.6

GTEX-X4EO-1226-SM-4QARR

60-69 years, female

1.6

Show all

ESOPHAGUS - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue